RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 FUT1P19526 365 aa16.27■□□□□ 0.2
PTPN21-208ENST00000556564 STARP49675 285 aa16.27■□□□□ 0.2
PTPN21-208ENST00000556564 BCAP31P51572 246 aa16.27■□□□□ 0.2
PTPN21-208ENST00000556564 MAD2L1BPQ15013 274 aaPredicted RBP16.27■□□□□ 0.2
PTPN21-208ENST00000556564 COQ10AQ96MF6 247 aa16.27■□□□□ 0.2
PTPN21-208ENST00000556564 ELF4Q99607 663 aaPredicted RBP16.27■□□□□ 0.2
PTPN21-208ENST00000556564 NMNAT1Q9HAN9 279 aaPredicted RBP16.27■□□□□ 0.2
PTPN21-208ENST00000556564 SNX11Q9Y5W9 270 aa16.27■□□□□ 0.2
PTPN21-208ENST00000556564 DLSTP36957 453 aa16.27■□□□□ 0.19
PTPN21-208ENST00000556564 DPTQ07507 201 aa16.27■□□□□ 0.19
PTPN21-208ENST00000556564 SYPL1Q16563 259 aa16.27■□□□□ 0.19
PTPN21-208ENST00000556564 BCL2L15Q5TBC7 163 aa16.27■□□□□ 0.19
PTPN21-208ENST00000556564 UNQ6126/PRO20091Q6UXV3 157 aa16.27■□□□□ 0.19
PTPN21-208ENST00000556564 UBQLN4Q9NRR5 601 aa16.27■□□□□ 0.19
PTPN21-208ENST00000556564 HBA1P69905 142 aa16.27■□□□□ 0.19
PTPN21-208ENST00000556564 HTR4Q13639 388 aa16.27■□□□□ 0.19
PTPN21-208ENST00000556564 TCTN1Q2MV58 587 aa16.27■□□□□ 0.19
PTPN21-208ENST00000556564 C9orf135Q5VTT2 229 aa16.27■□□□□ 0.19
PTPN21-208ENST00000556564 LILRA6Q6PI73 481 aa16.27■□□□□ 0.19
PTPN21-208ENST00000556564 PAPD4Q6PIY7 484 aaKnown RBP16.27■□□□□ 0.19
PTPN21-208ENST00000556564 RAB11FIP2Q7L804 512 aa16.27■□□□□ 0.19
PTPN21-208ENST00000556564 OR5T2Q8NGG2 359 aa16.27■□□□□ 0.19
PTPN21-208ENST00000556564 NXT1Q9UKK6 140 aaKnown RBP16.27■□□□□ 0.19
PTPN21-208ENST00000556564 GRIP1Q9Y3R0 1128 aa16.27■□□□□ 0.19
PTPN21-208ENST00000556564 MCM3APO60318 1980 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 IDUAP35475 653 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 PIGGQ5H8A4 983 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 CPZQ66K79 652 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 SLC18B1Q6NT16 456 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 CYP4V2Q6ZWL3 525 aaPredicted RBP16.26■□□□□ 0.19
PTPN21-208ENST00000556564 ESX1Q8N693 406 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 OR2T11Q8NH01 316 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 MS4A8Q9BY19 250 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 FARSAQ9Y285 508 aaKnown RBP16.26■□□□□ 0.19
PTPN21-208ENST00000556564 H0YIV9 168 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 APLNRP35414 380 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 DAP3P51398 398 aaKnown RBP16.26■□□□□ 0.19
PTPN21-208ENST00000556564 LIPKQ5VXJ0 399 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 SBSNQ6UWP8 590 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 TMEM239Q8WW34 195 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 CDCP1Q9H5V8 836 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 ADAM29Q9UKF5 820 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 METAP1P53582 386 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 ACTC1P68032 377 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 ACTA1P68133 377 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 POU4F2Q12837 409 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 GGTA1PQ4G0N0 100 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 OR2T4Q8NH00 348 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 PROKR1Q8TCW9 393 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 P2RY12Q9H244 342 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 DCSTAMPQ9H295 470 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 WDPCPO95876 746 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 ADH7P40394 386 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 GNG2P59768 71 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 TMEM17Q86X19 198 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 OR8S1Q8NH09 359 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 ZNF675Q8TD23 568 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 ZNF707Q96C28 371 aaPredicted RBP16.26■□□□□ 0.19
PTPN21-208ENST00000556564 NXPE2Q96DL1 559 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 PKMYT1Q99640 499 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 NUDT22Q9BRQ3 303 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 YTHDF1Q9BYJ9 559 aaKnown RBP16.26■□□□□ 0.19
PTPN21-208ENST00000556564 KLHL31Q9H511 634 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 FOLH1BQ9HBA9 442 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 SMURF1Q9HCE7 757 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 CELP19835 753 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 F8A1P23610 371 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 MAGEA8P43361 318 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 KIAA0907Q7Z7F0 614 aaPredicted RBP16.26■□□□□ 0.19
PTPN21-208ENST00000556564 C16orf58Q96GQ5 468 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 SPHK1Q9NYA1 384 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 WNT16Q9UBV4 365 aa16.26■□□□□ 0.19
PTPN21-208ENST00000556564 SLC22A31A6NKX4 558 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 MITFO75030 526 aaPredicted RBP16.25■□□□□ 0.19
PTPN21-208ENST00000556564 HSD17B1P14061 328 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 DCAF7P61962 342 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 EIF2B1Q14232 305 aaKnown RBP16.25■□□□□ 0.19
PTPN21-208ENST00000556564 HLA-BQ31612 363 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 KLBQ86Z14 1044 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 DTWD1Q8N5C7 304 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 UBTD2Q8WUN7 234 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 NINJ1Q92982 152 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 THOC3Q96J01 351 aaKnown RBP16.25■□□□□ 0.19
PTPN21-208ENST00000556564 PCDHB16Q9NRJ7 776 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 TNS1Q9HBL0 1735 aaKnown RBP16.25■□□□□ 0.19
PTPN21-208ENST00000556564 PABPC4LP0CB38 370 aaKnown RBP16.25■□□□□ 0.19
PTPN21-208ENST00000556564 PRPS1P60891 318 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 MICAQ29983 383 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 FAM83HQ6ZRV2 1179 aaPredicted RBP16.25■□□□□ 0.19
PTPN21-208ENST00000556564 ZNF548Q8NEK5 533 aaPredicted RBP16.25■□□□□ 0.19
PTPN21-208ENST00000556564 FKBP10Q96AY3 582 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 NRXN2Q9P2S2 1712 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 TRBV2A0A0J9YWF9 115 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 NPPBP16860 134 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 COL13A1Q5TAT6 717 aaPredicted RBP16.25■□□□□ 0.19
PTPN21-208ENST00000556564 GPALPP1Q8IXQ4 340 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 ZNF565Q8N9K5 539 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 TMEM14AQ9Y6G1 99 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 IST1P53990 364 aa16.25■□□□□ 0.19
PTPN21-208ENST00000556564 RUNDC3AQ59EK9 446 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms