RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 POLR3FQ9H1D9 316 aaPredicted RBP4.22□□□□□ -1.73
VRK1-205ENST00000555402 FAM120CQ9NX05 1096 aaKnown RBP4.22□□□□□ -1.73
VRK1-205ENST00000555402 ELOVL2Q9NXB9 296 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 DHRS4-AS1Q9P1J3 65 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 PAK5Q9P286 719 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 CRLS1Q9UJA2 301 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 OR10H1Q9Y4A9 318 aa4.22□□□□□ -1.73
VRK1-205ENST00000555402 TRAV9-2A0A087WT02 112 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 A0A1W2PPR1 153 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 KRTAP16-1A8MUX0 517 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 MPHOSPH10O00566 681 aaKnown RBP4.21□□□□□ -1.74
VRK1-205ENST00000555402 MAGEB3O15480 346 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 OR1F1O43749 312 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 HPP00738 406 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 PIGRP01833 764 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 ALPIP09923 528 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 XRCC1P18887 633 aaPredicted RBP4.21□□□□□ -1.74
VRK1-205ENST00000555402 PAX7P23759 505 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 CA8P35219 290 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 ACVR1BP36896 505 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 ELK3P41970 407 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 GNPDA1P46926 289 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 RPL34P49207 117 aaKnown RBP4.21□□□□□ -1.74
VRK1-205ENST00000555402 HNMTP50135 292 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 RGS1Q08116 209 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 PUDPQ08623 228 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 CFAP157Q5JU67 520 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 RABGAP1LQ5R372 815 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 CELF3Q5SZQ8 465 aaKnown RBP4.21□□□□□ -1.74
VRK1-205ENST00000555402 CASC1Q6TDU7 716 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 RGS9BPQ6ZS82 235 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 LYG1Q8N1E2 194 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 CNIH3Q8TBE1 160 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 CTNNBL1Q8WYA6 563 aaPredicted RBP4.21□□□□□ -1.74
VRK1-205ENST00000555402 MYLPFQ96A32 169 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 CASD1Q96PB1 797 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 FEM1AQ9BSK4 669 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 TMEM121Q9BTD3 319 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 ALG12Q9BV10 488 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 CUTCQ9NTM9 273 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 IMPAD1Q9NX62 359 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 MRPL39Q9NYK5 338 aaKnown RBP4.21□□□□□ -1.74
VRK1-205ENST00000555402 GALPQ9UBC7 116 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 DUSP12Q9UNI6 340 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 MRPS7Q9Y2R9 242 aaKnown RBP4.21□□□□□ -1.74
VRK1-205ENST00000555402 GMPPBQ9Y5P6 360 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 DDX49Q9Y6V7 483 aaKnown RBP4.21□□□□□ -1.74
VRK1-205ENST00000555402 SPACA6W5XKT8 324 aa4.21□□□□□ -1.74
VRK1-205ENST00000555402 NOTCH2Q04721 2471 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 PPIAL4DF5H284 164 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 G3V3Y1 287 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 K7EQM0 130 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 CTAGE5O15320 804 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 STX7O15400 261 aaKnown RBP4.2□□□□□ -1.74
VRK1-205ENST00000555402 PHF1O43189 567 aaPredicted RBP4.2□□□□□ -1.74
VRK1-205ENST00000555402 BCAS1O75363 584 aaPredicted RBP4.2□□□□□ -1.74
VRK1-205ENST00000555402 RHBDL1O75783 438 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 VENTXO95231 258 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 BCKDHAP12694 445 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 ATP5A1P25705 553 aaKnown RBP4.2□□□□□ -1.74
VRK1-205ENST00000555402 CSRP3P50461 194 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 IST1P53990 364 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 BDH1Q02338 343 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 ZFP36L1Q07352 338 aaKnown RBP4.2□□□□□ -1.74
VRK1-205ENST00000555402 ATXN7L3Q14CW9 347 aaPredicted RBP4.2□□□□□ -1.74
VRK1-205ENST00000555402 LTB4RQ15722 352 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 SLC22A6Q4U2R8 563 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 OR8G2PQ6IF36 304 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 ANKRD37Q7Z713 158 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 KIAA1328Q86T90 577 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 TMEM17Q86X19 198 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 UNC5CLQ8IV45 518 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 POM121L12Q8N7R1 296 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 RAET1EQ8TD07 263 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 OSTF1Q92882 214 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 SENP8Q96LD8 212 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 ZNF607Q96SK3 696 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 SLC30A2Q9BRI3 323 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 MEPEQ9NQ76 525 aaPredicted RBP4.2□□□□□ -1.74
VRK1-205ENST00000555402 EXOSC3Q9NQT5 275 aaKnown RBP4.2□□□□□ -1.74
VRK1-205ENST00000555402 SENP1Q9P0U3 644 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 TBK1Q9UHD2 729 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 SMC3Q9UQE7 1217 aa4.2□□□□□ -1.74
VRK1-205ENST00000555402 A0A1W2PNU3 283 aaPredicted RBP4.19□□□□□ -1.74
VRK1-205ENST00000555402 ZSCAN5BA6NJL1 495 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 SAP18O00422 153 aaKnown RBP4.19□□□□□ -1.74
VRK1-205ENST00000555402 HMMRO75330 724 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 TRIM3O75382 744 aaPredicted RBP4.19□□□□□ -1.74
VRK1-205ENST00000555402 MTX2O75431 263 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 KBTBD11O94819 623 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 RHOBTB1O94844 696 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 ACADSP16219 412 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 SHC1P29353 583 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 OTX2P32243 289 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 RPL4P36578 427 aaKnown RBP4.19□□□□□ -1.74
VRK1-205ENST00000555402 RGS4P49798 205 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 ARFIP1P53367 373 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 PEX6Q13608 980 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 SELPLGQ14242 412 aa4.19□□□□□ -1.74
VRK1-205ENST00000555402 DCST2Q5T1A1 773 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms