RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 CALHM3Q86XJ0 350 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 SLC30A8Q8IWU4 369 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 SULF2Q8IWU5 870 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 SLC15A3Q8IY34 581 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 ZNF619Q8N2I2 560 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 OR4C3Q8NH37 302 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 BBS10Q8TAM1 723 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 GRHL3Q8TE85 626 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 MAL2Q969L2 176 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 REXO5Q96IC2 774 aaKnown RBP13.09□□□□□ -0.31
CHD8-208ENST00000555301 HES7Q9BYE0 225 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 TBL1XR1Q9BZK7 514 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 SLC38A1Q9H2H9 487 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 MTHFD2LQ9H903 347 aaPredicted RBP13.09□□□□□ -0.31
CHD8-208ENST00000555301 BCL2L10Q9HD36 194 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 SDHAF3Q9NRP4 125 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 CMTM6Q9NX76 183 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 ABCD2Q9UBJ2 740 aa13.09□□□□□ -0.31
CHD8-208ENST00000555301 SUCOQ9UBS9 1254 aaKnown RBP13.09□□□□□ -0.31
CHD8-208ENST00000555301 A0A1W2PQD3 144 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 ALG1L2C9J202 215 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 NPIPB9F8W1W9 429 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 H3BNH8 94 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 RASAL1O95294 804 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 ENDOUP21128 410 aaKnown RBP13.08□□□□□ -0.32
CHD8-208ENST00000555301 GZMMP51124 257 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 GPR85P60893 370 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 SLC25A3Q00325 362 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 SCARB2Q14108 478 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 MAPK11Q15759 364 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 ZNF141Q15928 474 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 VMACQ2NL98 169 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 REEP3Q6NUK4 255 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 C6orf89Q6UWU4 347 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 PTOV1Q86YD1 416 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 MISPQ8IVT2 679 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 POGLUT1Q8NBL1 392 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 RBM15BQ8NDT2 890 aaKnown RBP13.08□□□□□ -0.32
CHD8-208ENST00000555301 HIPK4Q8NE63 616 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 OR2T12Q8NG77 320 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 OR2M7Q8NG81 312 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 NFKBIDQ8NI38 313 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 TMEM41AQ96HV5 264 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 ZNF583Q96ND8 569 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 TREX2Q9BQ50 279 aaPredicted RBP13.08□□□□□ -0.32
CHD8-208ENST00000555301 C1orf21Q9H246 121 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 CACYBPQ9HB71 228 aaKnown RBP13.08□□□□□ -0.32
CHD8-208ENST00000555301 DEPPQ9NTK1 212 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 FLRT3Q9NZU0 649 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 TMEM181Q9P2C4 612 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 ANAPC2Q9UJX6 822 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 BOKQ9UMX3 212 aaPredicted RBP13.08□□□□□ -0.32
CHD8-208ENST00000555301 ANGPT4Q9Y264 503 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 WIF1Q9Y5W5 379 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 DSPPQ9NZW4 1301 aa13.08□□□□□ -0.32
CHD8-208ENST00000555301 FAM220BPB1ANY3 271 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 G3V3Y1 287 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 NDUFB5O43674 189 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 UGT2B17O75795 530 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 ATP5HO75947 161 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 PGM3O95394 542 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 ZIC2O95409 532 aaPredicted RBP13.07□□□□□ -0.32
CHD8-208ENST00000555301 ELAVL4P26378 380 aaKnown RBP13.07□□□□□ -0.32
CHD8-208ENST00000555301 CPOXP36551 454 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 PTGDSP41222 190 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 MASP1P48740 699 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 DNASE1L1P49184 302 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 MEOX1P50221 254 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 EEFSECP57772 596 aaKnown RBP13.07□□□□□ -0.32
CHD8-208ENST00000555301 LIPEQ05469 1076 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 BNIP1Q12981 228 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 VEZF1Q14119 521 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 KLHL26Q53HC5 615 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 INTS11Q5TA45 600 aaKnown RBP13.07□□□□□ -0.32
CHD8-208ENST00000555301 BICRALQ6AI39 1079 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 OLIG3Q7RTU3 272 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.07□□□□□ -0.32
CHD8-208ENST00000555301 KRT73Q86Y46 540 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 PTRH1Q86Y79 214 aaKnown RBP13.07□□□□□ -0.32
CHD8-208ENST00000555301 PEX5LQ8IYB4 626 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 ZZZ3Q8IYH5 903 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 DEFB107AQ8IZN7 70 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 ZFP62Q8NB50 900 aaPredicted RBP13.07□□□□□ -0.32
CHD8-208ENST00000555301 FBXO27Q8NI29 283 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 SLC39A7Q92504 469 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 NTNG2Q96CW9 530 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 ZNF597Q96LX8 424 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 FRMD6Q96NE9 622 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 ALG2Q9H553 416 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 PIF1Q9H611 641 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 RUBCNLQ9H714 662 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 PROK2Q9HC23 129 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 GALNT9Q9HCQ5 603 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 ZFP64Q9NPA5 681 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 ADA2Q9NZK5 511 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 DTNAQ9Y4J8 743 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.07□□□□□ -0.32
CHD8-208ENST00000555301 EPG5Q9HCE0 2579 aa13.07□□□□□ -0.32
CHD8-208ENST00000555301 CPAMD8Q8IZJ3 1885 aa13.06□□□□□ -0.32
CHD8-208ENST00000555301 NPIPA5A0A0B4J1W7 369 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms