RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 SLC9A5Q14940 896 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 NIPAL1Q6NVV3 410 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 TUBA3EQ6PEY2 450 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 C6orf15Q6UXA7 325 aaPredicted RBP16.17■□□□□ 0.18
SHOX-204ENST00000554971 COX15Q7KZN9 410 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 C6orf120Q7Z4R8 191 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 NLGN4XQ8N0W4 816 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 LINC00471Q8N535 108 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 NLGN4YQ8NFZ3 816 aaPredicted RBP16.17■□□□□ 0.18
SHOX-204ENST00000554971 OR9A4Q8NGU2 314 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 OR52J3Q8NH60 311 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 SNIP1Q8TAD8 396 aaKnown RBP16.17■□□□□ 0.18
SHOX-204ENST00000554971 ZHX1-C8orf76Q96EF9 292 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 NIPSNAP1Q9BPW8 284 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 FAIM2Q9BWQ8 316 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 CDCA4Q9BXL8 241 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 MMP27Q9H306 513 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 RLIMQ9NVW2 624 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 MAU2Q9Y6X3 613 aa16.17■□□□□ 0.18
SHOX-204ENST00000554971 A0A0G2JN53 185 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 TAF4O00268 1085 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 RAD1O60671 282 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 GUCY1B2O75343 617 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 HBQ1P09105 142 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 ATXN8OSP0DMR3 200 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 LIPCP11150 499 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 CRISP1P54107 249 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 FOXL2P58012 376 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 ITGADQ13349 1161 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 GNA13Q14344 377 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 IRF3Q14653 427 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 DEFB134Q4QY38 66 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 ZNF770Q6IQ21 691 aaPredicted RBP16.16■□□□□ 0.18
SHOX-204ENST00000554971 TAGAPQ8N103 731 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 STX19Q8N4C7 294 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 AMER3Q8N944 861 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 Q96MT0 163 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 SPATA5L1Q9BVQ7 753 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 MROQ9BYG7 248 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 SLC7A5P2Q9GIP4 190 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 RACGAP1Q9H0H5 632 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 NDOR1Q9UHB4 597 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 DSPPQ9NZW4 1301 aa16.16■□□□□ 0.18
SHOX-204ENST00000554971 J3QRK9 145 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 RTCAO00442 366 aaKnown RBP16.15■□□□□ 0.18
SHOX-204ENST00000554971 FAAHO00519 579 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 TERTO14746 1132 aaKnown RBP16.15■□□□□ 0.18
SHOX-204ENST00000554971 PCDH17O14917 1159 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 ERI3O43414 337 aaKnown RBP16.15■□□□□ 0.18
SHOX-204ENST00000554971 CNOT3O75175 753 aaKnown RBP16.15■□□□□ 0.18
SHOX-204ENST00000554971 LCKP06239 509 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 PIPP12273 146 aaPredicted RBP16.15■□□□□ 0.18
SHOX-204ENST00000554971 ALOX12P18054 663 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 TNFRSF1BP20333 461 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 NR4A1P22736 598 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 F8A1P23610 371 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 STAT5AP42229 794 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 IDH2P48735 452 aaKnown RBP16.15■□□□□ 0.18
SHOX-204ENST00000554971 CLK1P49759 484 aaKnown RBP16.15■□□□□ 0.18
SHOX-204ENST00000554971 VBP1P61758 197 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 SRSF6Q13247 344 aaKnown RBP16.15■□□□□ 0.18
SHOX-204ENST00000554971 CLN3Q13286 438 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 PTGES3Q15185 160 aaKnown RBP16.15■□□□□ 0.18
SHOX-204ENST00000554971 TIGD6Q17RP2 521 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 SPDYE7PQ495Y7 208 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 NKAIN1Q4KMZ8 207 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 OR4C11Q6IEV9 310 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 ABHD17CQ6PCB6 329 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 BHLHB9Q6PI77 547 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 FAM198BQ6UWH4 519 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 USP43Q70EL4 1123 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 HORMAD2Q8N7B1 307 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 OR2L5Q8NG80 312 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 NDNFQ8TB73 568 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 MVB12AQ96EY5 273 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 ZNF354BQ96LW1 612 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 C17orf62Q9BQA9 187 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 CLN6Q9NWW5 311 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 PRRC2CQ9Y520 2896 aaKnown RBP16.15■□□□□ 0.18
SHOX-204ENST00000554971 LOC101059948A0A1B0GTJ6 334 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 ZNF860A6NHJ4 632 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 SGK494L7N484 410 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 AIREO43918 545 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 GALR3O60755 368 aaPredicted RBP16.15■□□□□ 0.18
SHOX-204ENST00000554971 NSA2O95478 260 aaKnown RBP16.15■□□□□ 0.18
SHOX-204ENST00000554971 ONECUT2O95948 504 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 HNRNPCP07910 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
SHOX-204ENST00000554971 KCNJ5P48544 419 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 CASP9P55211 416 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 SNRPGP62308 76 aaKnown RBP16.15■□□□□ 0.18
SHOX-204ENST00000554971 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.15■□□□□ 0.18
SHOX-204ENST00000554971 DUSP7Q16829 419 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 SYT16Q17RD7 645 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 FAM69BQ5VUD6 431 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 TMEM64Q6YI46 380 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 ZNF793Q6ZN11 406 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 ZNF367Q7RTV3 350 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 SLC46A3Q7Z3Q1 461 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 KRT73Q86Y46 540 aa16.15■□□□□ 0.18
SHOX-204ENST00000554971 CCDC103Q8IW40 242 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms