RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ZNF546Q86UE3 836 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 ARHGEF39Q8N4T4 335 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 SLC25A41Q8N5S1 370 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 FADS6Q8N9I5 356 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 OCC1Q8TAD7 63 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 RHEBL1Q8TAI7 183 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 LMO3Q8TAP4 145 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 WFDC5Q8TCV5 224 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 BLOC1S5Q8TDH9 187 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 TCP10LQ8TDR4 215 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 AENQ8WTP8 325 aaKnown RBP2.53□□□□□ -2
PRPF39-206ENST00000554429 SCARB1Q8WTV0 552 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 RASSF5Q8WWW0 418 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 ACOT11Q8WXI4 607 aaPredicted RBP2.53□□□□□ -2
PRPF39-206ENST00000554429 OR8D1Q8WZ84 308 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 FCGR1BQ92637 280 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 MYDGFQ969H8 173 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 MCUR1Q96AQ8 359 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 VOPP1Q96AW1 172 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 S100PBPQ96BU1 408 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 RNFT2Q96EX2 444 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 BTN2A3PQ96KV6 586 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 HARBI1Q96MB7 349 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 RNF145Q96MT1 663 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 SLC46A1Q96NT5 459 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 NSUN5Q96P11 429 aaKnown RBP2.53□□□□□ -2
PRPF39-206ENST00000554429 NPY6RQ99463 290 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 ZNF559Q9BR84 538 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 NUDT22Q9BRQ3 303 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 DUSP26Q9BV47 211 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 PKIBQ9C010 78 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 ZYG11BQ9C0D3 744 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 ACTR6Q9GZN1 396 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 TP63Q9H3D4 680 aaPredicted RBP2.53□□□□□ -2
PRPF39-206ENST00000554429 AUNIPQ9H7T9 357 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 GP6Q9HCN6 339 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 HEYLQ9NQ87 328 aaPredicted RBP2.53□□□□□ -2
PRPF39-206ENST00000554429 THSD1Q9NS62 852 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 FAM49BQ9NUQ9 324 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 IMP3Q9NV31 184 aaKnown RBP2.53□□□□□ -2
PRPF39-206ENST00000554429 MLXQ9UH92 298 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 TCFL5Q9UL49 500 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 ACOT9Q9Y305 439 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 TBL2Q9Y4P3 447 aaKnown RBP2.53□□□□□ -2
PRPF39-206ENST00000554429 TNFRSF18Q9Y5U5 241 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 KPTNQ9Y664 436 aa2.53□□□□□ -2
PRPF39-206ENST00000554429 MRPS18BQ9Y676 258 aaKnown RBP2.53□□□□□ -2
PRPF39-206ENST00000554429 A0A1B0GVM2 712 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 A0A1W2PNU3 283 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 UBA6A0AVT1 1052 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 NEMP2A6NFY4 417 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM191CA6NGB0 347 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 WIPF3A6NGB9 483 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CGB1A6NKQ9 187 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 YJEFN3A6XGL0 299 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 NPIPB8E9PQR5 432 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 WNT9AO14904 365 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SLC31A2O15432 143 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 INSIG1O15503 277 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SIGLEC6O43699 453 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 AHSA1O95433 338 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 FGGP02679 453 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 AMY2AP04746 511 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ERCC1P07992 297 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TRIM49P0CI25 452 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TRIM49CP0CI26 452 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PNMTP11086 282 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 RNH1P13489 461 aaKnown RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 AMY2BP19961 511 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 UQCRC2P22695 453 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 DTYMKP23919 212 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SLC6A2P23975 617 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 HLA-DMAP28067 261 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 MARCKSL1P49006 195 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 HCAR3P49019 387 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 RAB28P51157 221 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 FOLH1Q04609 750 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 HYAL2Q12891 473 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TSPAN31Q12999 210 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PON3Q15166 354 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 EXOC3L4Q17RC7 722 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 LRRC36Q1X8D7 754 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 GOLGA7BQ2TAP0 167 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 LACTB2Q53H82 288 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 DCAF6Q58WW2 860 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ZMAT1Q5H9K5 638 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PLAC9Q5JTB6 97 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 LRRC73Q5JTD7 316 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM201Q5SNT2 666 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 MARC1Q5VT66 337 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 LIPJQ5W064 366 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CLEC6AQ6EIG7 209 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PLEKHG7Q6ZR37 379 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PEX26Q7Z412 305 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 CENPVQ7Z7K6 275 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 SETD3Q86TU7 594 aaPredicted RBP2.52□□□□□ -2.01
PRPF39-206ENST00000554429 HORMAD1Q86X24 394 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 ARHGAP12Q8IWW6 846 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 FAM58AQ8N1B3 248 aa2.52□□□□□ -2.01
PRPF39-206ENST00000554429 PQLC1Q8N2U9 271 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms