RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 IFI6P09912 130 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 KLK2P20151 261 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 NT5EP21589 574 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 SLC6A2P23975 617 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 ADH7P40394 386 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 MC3RP41968 323 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 MNAT1P51948 309 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 RNF4P78317 190 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 MRPS35P82673 323 aaKnown RBP12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 MAP4K2Q12851 820 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 DUSP8Q13202 625 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 BIKQ13323 160 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 SELPLGQ14242 412 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 C1orf185Q5T7R7 199 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 WLSQ5T9L3 541 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 ARSKQ6UWY0 536 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 TMEM107Q6UX40 140 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 TMEM64Q6YI46 380 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 ZNF621Q6ZSS3 439 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 ASRGL1Q7L266 308 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 OR14A16Q8NHC5 309 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 ZFP90Q8TF47 636 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 NINJ1Q92982 152 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 FAM120BQ96EK7 910 aaKnown RBP12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 AURKBQ96GD4 344 aaPredicted RBP12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 ANKRD27Q96NW4 1050 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 DGAT2Q96PD7 388 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 PELOQ9BRX2 385 aaKnown RBP12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 CNPPD1Q9BV87 410 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 CXXC4Q9H2H0 198 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 LIME1Q9H400 295 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 ANKRA2Q9H9E1 313 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 GPATCH2Q9NW75 528 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 GID8Q9NWU2 228 aa12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 TUBA8Q9NY65 449 aaPredicted RBP12.83□□□□□ -0.36
SPTLC2-202ENST00000554365 SPG11Q96JI7 2443 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 A0A1B0GVC2 190 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 FAM221AA4D161 298 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 C17orf105B2RV13 164 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 UPK1AO00322 258 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 OR10H2O60403 315 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 PLOD3O60568 738 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 ZNF354AO60765 605 aaPredicted RBP12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 HNRNPCL1O60812 293 aaKnown RBP12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 WDR1O75083 606 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 PSMG1O95456 288 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 CBX7O95931 251 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 KRT16P08779 473 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 CCL3P10147 92 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 HOXB4P17483 251 aaPredicted RBP12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 UQCRC2P22695 453 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 KIR2DL3P43628 341 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 MVDP53602 400 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 PSME3P61289 254 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 SLC10A1Q14973 349 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 SLC25A35Q3KQZ1 300 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 TRMT12Q53H54 448 aaKnown RBP12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 SAXO2Q658L1 398 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 NANOGP8Q6NSW7 305 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 OPN5Q6U736 354 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 PGAM4Q8N0Y7 254 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 C10orf111Q8N326 155 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 OR2L13Q8N349 312 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 GOLM1Q8NBJ4 401 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 OR5L2Q8NGL0 311 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 OR5AK3PQ8NH89 298 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 SLC2A12Q8TD20 617 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 SFXN5Q8TD22 340 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 SARAFQ96BY9 339 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 GIMAP5Q96F15 307 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 SGCZQ96LD1 299 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 SLC35A5Q9BS91 424 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 LRMDAQ9H2I8 198 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 SERHL2Q9H4I8 314 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 NANOGQ9H9S0 305 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 CMTM6Q9NX76 183 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 ST6GALNAC2Q9UJ37 374 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 PCDHGB4Q9UN71 923 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 ZNF407Q9C0G0 2248 aa12.82□□□□□ -0.36
SPTLC2-202ENST00000554365 A0A087WV62 115 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 TRGV5A0A0B4J1U4 118 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 RNF103-CHMP3A0A140T963 221 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 ERICH4A6NGS2 130 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 EMC8O43402 210 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 SUSD5O60279 629 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 SLITRK5O94991 958 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 UQCRC1P31930 480 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 GPC1P35052 558 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 SOAT1P35610 550 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 PIGAP37287 484 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 CCT3P49368 545 aaKnown RBP12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 MTPNP58546 118 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 FUT7Q11130 342 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 FOXO1Q12778 655 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 RABL3Q5HYI8 236 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 EXOSC6Q5RKV6 272 aaKnown RBP12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 GALNT12Q8IXK2 581 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 SLC15A3Q8IY34 581 aa12.81□□□□□ -0.36
SPTLC2-202ENST00000554365 DEFB107AQ8IZN7 70 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms