RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 CA8P35219 290 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 ACVR1BP36896 505 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 SLC8A3P57103 927 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 OSTNP61366 133 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 PAX2Q02962 417 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 CAMK4Q16566 473 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 CCDC57Q2TAC2 916 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 SLC36A3Q495N2 470 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 NADK2Q4G0N4 442 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 FAM120AOSQ5T036 256 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 RNLSQ5VYX0 342 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 DPY19L4Q7Z388 723 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 SERINC5Q86VE9 423 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 ZDHHC21Q8IVQ6 265 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 BPIFB2Q8N4F0 458 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 ARL6IP6Q8N6S5 226 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 VN1R17PQ8TDU5 208 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 ADAMTS16Q8TE57 1224 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 AGAP11Q8TF27 550 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 TRIM44Q96DX7 344 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-210ENST00000553455 SLC30A2Q9BRI3 323 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 ERP44Q9BS26 406 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 NFKBIZQ9BYH8 718 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 OPN3Q9H1Y3 402 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-210ENST00000553455 FARSBQ9NSD9 589 aaKnown RBP3.95□□□□□ -1.78
SYNE2-210ENST00000553455 SENP1Q9P0U3 644 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 TMCC3Q9ULS5 477 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 SMC3Q9UQE7 1217 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 GMPPBQ9Y5P6 360 aa3.95□□□□□ -1.78
SYNE2-210ENST00000553455 EFCAB7A8K855 629 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 FAM220BPB1ANY3 271 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 CPLX1O14810 134 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 BCL2L11O43521 198 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 TM7SF2O76062 418 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 B3GAT3O94766 335 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 IGF1P05019 195 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 IQCF3P0C7M6 154 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 CLUP10909 449 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 MAGEA5P43359 124 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 BDKRB1P46663 353 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 NOVA1P51513 510 aaKnown RBP3.94□□□□□ -1.78
SYNE2-210ENST00000553455 RPL8P62917 257 aaKnown RBP3.94□□□□□ -1.78
SYNE2-210ENST00000553455 NUCB2P80303 420 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 PUDPQ08623 228 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 PEX6Q13608 980 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 ATXN7L3Q14CW9 347 aaPredicted RBP3.94□□□□□ -1.78
SYNE2-210ENST00000553455 MAPK6Q16659 721 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 CYP51A1Q16850 503 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 C15orf32Q32M92 178 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 PNNQ9H307 717 aaKnown RBP3.94□□□□□ -1.78
SYNE2-210ENST00000553455 CUTCQ9NTM9 273 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 EHFQ9NZC4 300 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 USP16Q9Y5T5 823 aa3.94□□□□□ -1.78
SYNE2-210ENST00000553455 FRG2CA6NGY1 282 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 PPIAL4DF5H284 164 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 STX7O15400 261 aaKnown RBP3.93□□□□□ -1.78
SYNE2-210ENST00000553455 ZSCAN12O43309 604 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 TBX19O60806 448 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 CPN1P15169 458 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 NT5EP21589 574 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 PTBP1P26599 531 aaKnown RBP eCLIP3.93□□□□□ -1.78
SYNE2-210ENST00000553455 IL2RGP31785 369 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 PTGER3P43115 390 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 RPL34P49207 117 aaKnown RBP3.93□□□□□ -1.78
SYNE2-210ENST00000553455 DSCR10P59022 87 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 TGIF1Q15583 401 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 Q1RN00 199 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 DCST2Q5T1A1 773 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 PVRIGQ6DKI7 326 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 PYHIN1Q6K0P9 492 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 IFNEQ86WN2 208 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 HSCBQ8IWL3 235 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 LINC01561Q8N1V8 128 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 TYMSOSQ8TAI1 123 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 RAET1EQ8TD07 263 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 GTSF1Q8WW33 167 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 ARNTL2Q8WYA1 636 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 PPP1R16AQ96I34 528 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 VPS39Q96JC1 886 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 TMEM117Q9H0C3 514 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 RMND5AQ9H871 391 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 MRPL39Q9NYK5 338 aaKnown RBP3.93□□□□□ -1.78
SYNE2-210ENST00000553455 GSTK1Q9Y2Q3 226 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 USP6P35125 1406 aa3.93□□□□□ -1.78
SYNE2-210ENST00000553455 IGHV3-35A0A0C4DH35 117 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 SAGE2PA6NJ88 616 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 A8MX80 341 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 LATO43561 262 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 OR1F1O43749 312 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 TRIM3O75382 744 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-210ENST00000553455 SLC35E2P0CK97 266 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 TPSB2P20231 275 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 PSMA2P25787 234 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 CDH5P33151 784 aaPredicted RBP3.92□□□□□ -1.78
SYNE2-210ENST00000553455 LIM2P55344 173 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 NTHL1P78549 312 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 CXCL6P80162 114 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 PJVKQ0ZLH3 352 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 ZNF154Q13106 437 aa3.92□□□□□ -1.78
SYNE2-210ENST00000553455 TPSAB1Q15661 275 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms