RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 ANGPTL1O95841 491 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 AGR2O95994 175 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 IGKV1D-16P01601 117 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 IDO1P14902 403 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 MSX1P28360 303 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 S100A3P33764 101 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 ZFP36L2P47974 494 aaKnown RBP13.94□□□□□ -0.18
SHMT2-204ENST00000553324 WNT3P56703 355 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 RCAN2Q14206 197 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 HSPB2Q16082 182 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 BCL2A1Q16548 175 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 GSTA3Q16772 222 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 GRAMD1BQ3KR37 738 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 GLYR1Q49A26 553 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-204ENST00000553324 NXNQ6DKJ4 435 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 HIST2H2BCQ6DN03 193 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 FIGNL1Q6PIW4 674 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 NCCRP1Q6ZVX7 275 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-204ENST00000553324 C6orf120Q7Z4R8 191 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 MARCH3Q86UD3 253 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 LACC1Q8IV20 430 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 OR4A15Q8NGL6 344 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 ZPLD1Q8TCW7 415 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 NUDT8Q8WV74 236 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 WDYHV1Q96HA8 205 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 MAELQ96JY0 434 aaKnown RBP13.94□□□□□ -0.18
SHMT2-204ENST00000553324 C7orf26Q96N11 449 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 DSN1Q9H410 356 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 WDR55Q9H6Y2 383 aaPredicted RBP13.94□□□□□ -0.18
SHMT2-204ENST00000553324 CALHM2Q9HA72 323 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 KCNJ16Q9NPI9 418 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 AIG1Q9NVV5 245 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 GPATCH2Q9NW75 528 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 CAMK2AQ9UQM7 478 aa13.94□□□□□ -0.18
SHMT2-204ENST00000553324 IGLV3-32A0A0A0MS00 114 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 CD8B2A6NJW9 211 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 AK1P00568 194 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 ALDOCP09972 364 aaKnown RBP13.93□□□□□ -0.18
SHMT2-204ENST00000553324 MATN1P21941 496 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 UQCRC2P22695 453 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 SOAT1P35610 550 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 TIMP3P35625 211 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 GFRA1P56159 465 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 TTMPQ5BVD1 217 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 NSUN5P2Q63ZY6 315 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 RPRMLQ8N4K4 120 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 TRIML2Q8N7C3 387 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 ZNF527Q8NB42 609 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 OR2M3Q8NG83 312 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 OR4C3Q8NH37 302 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 FBXO30Q8TB52 745 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 SFXN2Q96NB2 322 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 ACBD3Q9H3P7 528 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 FLRT3Q9NZU0 649 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 MED11Q9P086 117 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 STOML1Q9UBI4 398 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 BTNL2Q9UIR0 455 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 GPR45Q9Y5Y3 372 aa13.93□□□□□ -0.18
SHMT2-204ENST00000553324 GOLGA8QA0A0J9YX86 632 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 A0A1W2PQD3 144 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 GOLGA8OA6NCC3 632 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 GOLGA8NF8WBI6 632 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 H3BNH8 94 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 SCN2BO60939 215 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 OXSR1O95747 527 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-204ENST00000553324 IL2RAP01589 272 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 IL6P05231 212 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 HK1P19367 917 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 EEFSECP57772 596 aaKnown RBP13.92□□□□□ -0.18
SHMT2-204ENST00000553324 UFM1P61960 85 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 PPP2R2AP63151 447 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 STX5Q13190 355 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 FAM174BQ3ZCQ3 159 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 ACSF3Q4G176 576 aaPredicted RBP13.92□□□□□ -0.18
SHMT2-204ENST00000553324 PDCD4Q53EL6 469 aaKnown RBP13.92□□□□□ -0.18
SHMT2-204ENST00000553324 SPANXN4Q5MJ08 99 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 ZNF787Q6DD87 383 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 MTERF4Q7Z6M4 381 aaKnown RBP13.92□□□□□ -0.18
SHMT2-204ENST00000553324 CLECL1Q8IZS7 167 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 CDS1Q92903 461 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 PIGQQ9BRB3 760 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 INTS9Q9NV88 658 aaKnown RBP13.92□□□□□ -0.18
SHMT2-204ENST00000553324 EXD2Q9NVH0 621 aa13.92□□□□□ -0.18
SHMT2-204ENST00000553324 A0A087WZY1 265 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 A0A0G2JNJ9 132 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 RNF103-CHMP3A0A140T963 221 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 UBDO15205 165 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 DIAPH2O60879 1101 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 SLC22A3O75751 556 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 CPSF4O95639 269 aaKnown RBP13.91□□□□□ -0.18
SHMT2-204ENST00000553324 PGRP06401 933 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 PEPDP12955 493 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 COX6B1P14854 86 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 GRNP28799 593 aaKnown RBP13.91□□□□□ -0.18
SHMT2-204ENST00000553324 PHC1P78364 1004 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 TXNL4AP83876 142 aaKnown RBP13.91□□□□□ -0.18
SHMT2-204ENST00000553324 CDSNQ15517 529 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 SLC25A35Q3KQZ1 300 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 SLC9B1Q4ZJI4 515 aa13.91□□□□□ -0.18
SHMT2-204ENST00000553324 DCST2Q5T1A1 773 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms