RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 ASPGQ86U10 573 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 PRPF39Q86UA1 669 aaKnown RBP4.43□□□□□ -1.7
ATXN3-218ENST00000553309 TMEM135Q86UB9 458 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 IQCHQ86VS3 1027 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 SLC22A9Q8IVM8 553 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 CCDC36Q8IYA8 594 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 ELMOD2Q8IZ81 293 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 BLIDQ8IZY5 108 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 SLC22A18ASQ8N1D0 253 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 ARHGAP24Q8N264 748 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 Q8N9G6 341 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-218ENST00000553309 OR1J2Q8NGS2 313 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 HM13Q8TCT9 377 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 LMX1AQ8TE12 382 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 DNAJC9Q8WXX5 260 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 RAD51AP1Q96B01 352 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 ZNF501Q96CX3 271 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-218ENST00000553309 SCRN2Q96FV2 425 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 PERPQ96FX8 193 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 RADILQ96JH8 1075 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 SLC45A3Q96JT2 553 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 WDFY2Q96P53 400 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 SLC29A1Q99808 456 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 SMR3AQ99954 134 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 TRIM62Q9BVG3 475 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 GON7Q9BXV9 100 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 DPEP3Q9H4B8 488 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 ZNF696Q9H7X3 374 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 PANK4Q9NVE7 773 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 DPP3Q9NY33 737 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 MARCH4Q9P2E8 410 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-218ENST00000553309 CYTH4Q9UIA0 394 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 LSM7Q9UK45 103 aaKnown RBP4.43□□□□□ -1.7
ATXN3-218ENST00000553309 NUP50Q9UKX7 468 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 MTMR6Q9Y217 621 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 ERGIC3Q9Y282 383 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 RPH3AQ9Y2J0 694 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-218ENST00000553309 MRPS18BQ9Y676 258 aaKnown RBP4.43□□□□□ -1.7
ATXN3-218ENST00000553309 CLIC4Q9Y696 253 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 USH1CQ9Y6N9 552 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 SESN1Q9Y6P5 492 aa4.43□□□□□ -1.7
ATXN3-218ENST00000553309 LOC101059948A0A1B0GTJ6 334 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 FAM237BA0A1B0GVD1 139 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 ARGFXA6NJG6 315 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 A8MX80 341 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 C10orf142B7Z368 130 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 H7C0C1 242 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 NDUFS8O00217 210 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 PSMD11O00231 422 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 CLDN5O00501 218 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 AP3D1O14617 1153 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 SCO2O43819 266 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 RAD1O60671 282 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 JAK2O60674 1132 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 CTSVO60911 334 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 HUS1O60921 280 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 BMP10O95393 424 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 CLPTM1O96005 669 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 IL6P05231 212 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 GLAP06280 429 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 HMBSP08397 361 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 TFPTP0C1Z6 253 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 FAM228BP0C875 321 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 MYBL1P10243 752 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 ANXA8P13928 327 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 GFAPP14136 432 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 NQO1P15559 274 aaKnown RBP4.42□□□□□ -1.7
ATXN3-218ENST00000553309 GM2AP17900 193 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 TCN2P20062 427 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 KLK2P20151 261 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 LMO2P25791 158 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 CD82P27701 267 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 PSMA5P28066 241 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 PTGER4P35408 488 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 PRRC2AP48634 2157 aaKnown RBP4.42□□□□□ -1.7
ATXN3-218ENST00000553309 RAP1GDS1P52306 607 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 PRAMEP78395 509 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 KCNJ10P78508 379 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 GUCY2DQ02846 1103 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 OVGP1Q12889 678 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 C1orf61Q13536 156 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 ITIH4Q14624 930 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 TGFBIQ15582 683 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 KCNJ8Q15842 424 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 AANATQ16613 207 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 ZNF805Q5CZA5 627 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 MDH1BQ5I0G3 518 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 ANXA8L1Q5VT79 327 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 SLX4IPQ5VYV7 408 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 NSUN5P2Q63ZY6 315 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 FBXL22Q6P050 247 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 ERICH5Q6P6B1 374 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 DHRS4L2Q6PKH6 230 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 CYP20A1Q6UW02 462 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 CEACAM20Q6UY09 585 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 CHST9Q7L1S5 443 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 PTAR1Q7Z6K3 402 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-218ENST00000553309 CPLX4Q7Z7G2 160 aa4.42□□□□□ -1.7
ATXN3-218ENST00000553309 TBC1D1Q86TI0 1168 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-218ENST00000553309 CATSPER3Q86XQ3 398 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms