RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 ESM1Q9NQ30 184 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 KIAA1257Q9ULG3 409 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 CA5BQ9Y2D0 317 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 NPTNQ9Y639 398 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 ALG6Q9Y672 507 aa4.88□□□□□ -1.63
SCFD1-208ENST00000553278 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-208ENST00000553278 IGHV3-20A0A0C4DH32 117 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 GOLGA6L7A0A1B0GV03 622 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 BTBD17A6NE02 478 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 IGLON5A6NGN9 336 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 HHLA1C9JL84 531 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 C11orf98E9PRG8 122 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 NUDT14O95848 222 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 IGFBP1P08833 259 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-208ENST00000553278 OR9G9P0C7N8 305 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 PABPC4LP0CB38 370 aaKnown RBP4.87□□□□□ -1.63
SCFD1-208ENST00000553278 PDHA2P29803 388 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 CCT6AP40227 531 aaKnown RBP4.87□□□□□ -1.63
SCFD1-208ENST00000553278 OPRL1P41146 370 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 TNNT2P45379 298 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-208ENST00000553278 BDKRB1P46663 353 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 CYCSP99999 105 aaKnown RBP4.87□□□□□ -1.63
SCFD1-208ENST00000553278 ZNF85Q03923 595 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 ZNF177Q13360 481 aaPredicted RBP4.87□□□□□ -1.63
SCFD1-208ENST00000553278 MTHFSDQ2M296 383 aaKnown RBP4.87□□□□□ -1.63
SCFD1-208ENST00000553278 HLA-BQ31612 363 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 SFT2D3Q587I9 215 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 SPANXN2Q5MJ10 180 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 PDZK1Q5T2W1 519 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 WLSQ5T9L3 541 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 FRRS1Q6ZNA5 592 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 STOX1Q6ZVD7 989 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 CYS1Q717R9 158 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 CEACAM19Q7Z692 300 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 BIVMQ86UB2 503 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 KCNMB4Q86W47 210 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 ARL14Q8N4G2 192 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 ZNF781Q8N8C0 355 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 SAMD12Q8N8I0 201 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 TRPV1Q8NER1 839 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 MCUR1Q96AQ8 359 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 CHP1Q99653 195 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 TMEM121Q9BTD3 319 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 MMP28Q9H239 520 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 CLSTN2Q9H4D0 955 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 IL1RAPQ9NPH3 570 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 RPRD1BQ9NQG5 326 aaKnown RBP4.87□□□□□ -1.63
SCFD1-208ENST00000553278 POLE4Q9NR33 117 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 THYN1Q9P016 225 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 ZNF639Q9UID6 485 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 ICAM5Q9UMF0 924 aa4.87□□□□□ -1.63
SCFD1-208ENST00000553278 TRBV7-9A0A0J9YWB2 115 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 A0A1B0GUV1 79 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 PMS2P5A8MQ11 134 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 TCP11X1B4DZS4 312 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 TRAFD1O14545 582 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-208ENST00000553278 MSH4O15457 936 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 RNF13O43567 381 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 NXPH4O95158 308 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 JCHAINP01591 159 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 FCGR3AP08637 254 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 CYP2B6P20813 491 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 ATP5A1P25705 553 aaKnown RBP4.86□□□□□ -1.63
SCFD1-208ENST00000553278 PPP2R1BP30154 601 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 CHRNB4P30926 498 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 NF2P35240 595 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 MMP12P39900 470 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 P2RY1P47900 373 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 THBS3P49746 956 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 NOVA1P51513 510 aaKnown RBP4.86□□□□□ -1.63
SCFD1-208ENST00000553278 EFNB2P52799 333 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 RPS6P62753 249 aaKnown RBP4.86□□□□□ -1.63
SCFD1-208ENST00000553278 IL18Q14116 193 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 DPYSL2Q16555 572 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 C6orf226Q5I0X4 101 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 MUC21Q5SSG8 566 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 DCST2Q5T1A1 773 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 BEND3Q5T5X7 828 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 OR2A2Q6IF42 318 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 FAM53AQ6NSI3 398 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-208ENST00000553278 ADAMTSL5Q6ZMM2 481 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 KIF6Q6ZMV9 814 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 Q6ZSR9 355 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 APTXQ7Z2E3 356 aaKnown RBP4.86□□□□□ -1.63
SCFD1-208ENST00000553278 EGFL6Q8IUX8 553 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 DHRSXQ8N5I4 330 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 MFSD9Q8NBP5 474 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 C17orf47Q8NEP4 570 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 OR52K1Q8NGK4 314 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 OR1L4Q8NGR5 311 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 MRGPRDQ8TDS7 321 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 AENQ8WTP8 325 aaKnown RBP4.86□□□□□ -1.63
SCFD1-208ENST00000553278 MAIP1Q8WWC4 291 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 STARD8Q92502 1023 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 C11orf52Q96A22 123 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 C10orf35Q96D05 121 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 CNRIP1Q96F85 164 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-208ENST00000553278 ST6GALNAC5Q9BVH7 336 aa4.86□□□□□ -1.63
SCFD1-208ENST00000553278 RNF41Q9H4P4 317 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-208ENST00000553278 FANCEQ9HB96 536 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms