RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 GIFP27352 417 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 AHRP35869 848 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 CCR6P51684 374 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 PNLIPRP1P54315 467 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 VSX2P58304 361 aaPredicted RBP11.57□□□□□ -0.56
HDAC7-230ENST00000552960 CDK5Q00535 292 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 PARS2Q7L3T8 475 aaKnown RBP11.57□□□□□ -0.56
HDAC7-230ENST00000552960 CHMP1BQ7LBR1 199 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 KIAA0907Q7Z7F0 614 aaPredicted RBP11.57□□□□□ -0.56
HDAC7-230ENST00000552960 METTL3Q86U44 580 aaKnown RBP11.57□□□□□ -0.56
HDAC7-230ENST00000552960 COMMD7Q86VX2 200 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 LIX1LQ8IVB5 337 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 ETFBKMTQ8IXQ9 262 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 KRT78Q8N1N4 520 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 PIAS4Q8N2W9 510 aaPredicted RBP11.57□□□□□ -0.56
HDAC7-230ENST00000552960 TRAM1L1Q8N609 369 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 GALNT11Q8NCW6 608 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 OR5AR1Q8NGP9 310 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 SMAP2Q8WU79 429 aaPredicted RBP11.57□□□□□ -0.56
HDAC7-230ENST00000552960 FGF14Q92915 247 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 SMARCD2Q92925 531 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 TIFAQ96CG3 184 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 ZC3HAV1LQ96H79 300 aaKnown RBP11.57□□□□□ -0.56
HDAC7-230ENST00000552960 MAN2C1Q9NTJ4 1040 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 SPTBP11277 2137 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 UBXN7O94888 489 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 FGF19O95750 216 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 EIF4EP06730 217 aaKnown RBP11.57□□□□□ -0.56
HDAC7-230ENST00000552960 PAICSP22234 425 aaKnown RBP11.57□□□□□ -0.56
HDAC7-230ENST00000552960 FGF9P31371 208 aaPredicted RBP11.57□□□□□ -0.56
HDAC7-230ENST00000552960 TRIM23P36406 574 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 PRLHRP49683 370 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 NCBP2P52298 156 aaKnown RBP eCLIP11.57□□□□□ -0.56
HDAC7-230ENST00000552960 MINDY4Q4G0A6 757 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 HENMT1Q5T8I9 393 aaKnown RBP11.57□□□□□ -0.56
HDAC7-230ENST00000552960 BHLHB9Q6PI77 547 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 CPEB1Q9BZB8 566 aaKnown RBP11.57□□□□□ -0.56
HDAC7-230ENST00000552960 PIGUQ9H490 435 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 FOLH1BQ9HBA9 442 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 NEUROD4Q9HD90 331 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 TNFRSF10DQ9UBN6 386 aa11.57□□□□□ -0.56
HDAC7-230ENST00000552960 PPIEQ9UNP9 301 aaKnown RBP11.57□□□□□ -0.56
HDAC7-230ENST00000552960 WDFY4Q6ZS81 3184 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 ATP6V1G2-DDX39BF2Z307 99 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 HRGP04196 525 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 MRPL3P09001 348 aaKnown RBP11.56□□□□□ -0.56
HDAC7-230ENST00000552960 GAS1P54826 345 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 STXBP1P61764 594 aaKnown RBP11.56□□□□□ -0.56
HDAC7-230ENST00000552960 HYAL1Q12794 435 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 DSG2Q14126 1118 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 ZMYND11Q15326 602 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 PARM1Q6UWI2 310 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 LYPD4Q6UWN0 246 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 ESPNLQ6ZVH7 1005 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 NR2C2APQ86WQ0 139 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 CPOQ8IVL8 374 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 BBS10Q8TAM1 723 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 GANCQ8TET4 914 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 MYADMQ96S97 322 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 FAM83CQ9BQN1 747 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 MARK1Q9P0L2 795 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 IL36AQ9UHA7 158 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 FRYLO94915 3013 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 A0A0B4J203 849 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 QSOX1O00391 747 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 SPINT1O43278 529 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 OR1F1O43749 312 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 TMPRSS11DO60235 418 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 REM1O75628 298 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 TFPIP10646 304 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 ANXA3P12429 323 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 AP2S1P53680 142 aaPredicted RBP11.56□□□□□ -0.56
HDAC7-230ENST00000552960 FNDC3BQ53EP0 1204 aaKnown RBP11.56□□□□□ -0.56
HDAC7-230ENST00000552960 SYT9Q86SS6 491 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 C17orf64Q86WR6 236 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 CCDC116Q8IYX3 515 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 OR10H4Q8NGA5 316 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 RIT1Q92963 219 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 C16orf58Q96GQ5 468 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 KCNJ15Q99712 375 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 C19orf43Q9BQ61 176 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 FGF20Q9NP95 211 aaPredicted RBP11.56□□□□□ -0.56
HDAC7-230ENST00000552960 SIRT3Q9NTG7 399 aaPredicted RBP11.56□□□□□ -0.56
HDAC7-230ENST00000552960 CACNG2Q9Y698 323 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 ARID1BQ8NFD5 2236 aaPredicted RBP11.56□□□□□ -0.56
HDAC7-230ENST00000552960 TBC1D3BA6NDS4 549 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 TEX46H3BTG2 121 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 POP7O75817 140 aaKnown RBP11.56□□□□□ -0.56
HDAC7-230ENST00000552960 SLC6A1P30531 599 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 NUDT1P36639 197 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 ACVR1BP36896 505 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 RGS1Q08116 209 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 SNTA1Q13424 505 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 NDUFA9Q16795 377 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 ZNF311Q5JNZ3 666 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 KHDRBS2Q5VWX1 349 aaKnown RBP11.56□□□□□ -0.56
HDAC7-230ENST00000552960 C1orf94Q6P1W5 598 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 TMEM91Q6ZNR0 172 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 VRK2Q86Y07 508 aa11.56□□□□□ -0.56
HDAC7-230ENST00000552960 IZUMO1Q8IYV9 350 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms