RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 CCBE1Q6UXH8 406 aaPredicted RBP13.21□□□□□ -0.29
CALCOCO1-218ENST00000550804 WDR88Q6ZMY6 472 aa13.21□□□□□ -0.29
CALCOCO1-218ENST00000550804 ZNF836Q6ZNA1 936 aa13.21□□□□□ -0.29
CALCOCO1-218ENST00000550804 Q6ZSR6 202 aa13.21□□□□□ -0.29
CALCOCO1-218ENST00000550804 UTS2BQ765I0 119 aa13.21□□□□□ -0.29
CALCOCO1-218ENST00000550804 CELF2-AS1Q8N7Q2 184 aa13.21□□□□□ -0.29
CALCOCO1-218ENST00000550804 NT5CQ8TCD5 201 aa13.21□□□□□ -0.29
CALCOCO1-218ENST00000550804 UBE2ZQ9H832 354 aaPredicted RBP13.21□□□□□ -0.29
CALCOCO1-218ENST00000550804 MTHFD2LQ9H903 347 aaPredicted RBP13.21□□□□□ -0.29
CALCOCO1-218ENST00000550804 SEC14L4Q9UDX3 406 aa13.21□□□□□ -0.29
CALCOCO1-218ENST00000550804 PILRAQ9UKJ1 303 aa13.21□□□□□ -0.29
CALCOCO1-218ENST00000550804 SSR3Q9UNL2 185 aa13.21□□□□□ -0.29
CALCOCO1-218ENST00000550804 ZNF443Q9Y2A4 671 aaPredicted RBP13.21□□□□□ -0.29
CALCOCO1-218ENST00000550804 TMEM265A0A087WTH1 108 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 ZC3H12DA2A288 527 aaKnown RBP13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 SYNDIG1LA6NDD5 238 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 HYAL3O43820 417 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 ATXN8OSP0DMR3 200 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 PRKAR1BP31321 381 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 SDC2P34741 201 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 RFX3P48380 749 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 RORCP51449 518 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 ARFIP1P53367 373 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 KIAA1024LP59773 190 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 SELENBP1Q13228 472 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 BAK1Q16611 211 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 PRAMEF8Q5VWM4 474 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 PRAMEF7Q5VXH5 474 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 CDC73Q6P1J9 531 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 FIGNL1Q6PIW4 674 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 RASSF6Q6ZTQ3 369 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 OR8H2Q8N162 312 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 LINC00471Q8N535 108 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 PIGXQ8TBF5 258 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 MS4A4EQ96PG1 132 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 SP140LQ9H930 580 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 SMURF1Q9HCE7 757 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 C20orf141Q9NUB4 165 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 KLHL3Q9UH77 587 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 PCOLCE2Q9UKZ9 415 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 NDRG2Q9UN36 371 aaKnown RBP13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 SLC22A7Q9Y694 548 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 ARHGEF17Q96PE2 2063 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 B3GALT2O43825 422 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 KDM1AO60341 852 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 HOXC4P09017 264 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 CT62P0C5K7 136 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 TSPAN19P0C672 248 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 CPEP16870 476 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 ZNF24P17028 368 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 MYL12AP19105 171 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 HNRNPA2B1P22626 353 aaKnown RBP13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 NDUFS1P28331 727 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 ZNF136P52737 540 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 TPTEP56180 551 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 WNT4P56705 351 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 CDC20Q12834 499 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 RNLSQ5VYX0 342 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 SLC36A4Q6YBV0 504 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 HSDL2Q6YN16 418 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 Q6ZS52 159 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 LAPTM4BQ86VI4 370 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 TRIM69Q86WT6 500 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 SLC22A18ASQ8N1D0 253 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 OR13H1Q8NG92 308 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 ACOT11Q8WXI4 607 aaPredicted RBP13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 SLC22A18Q96BI1 424 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 SAMD8Q96LT4 415 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 SERINC2Q96SA4 455 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 ATP13A2Q9NQ11 1180 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 TIGARQ9NQ88 270 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 KLHL28Q9NXS3 571 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 IL20Q9NYY1 176 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 SLCO1B1Q9Y6L6 691 aa13.2□□□□□ -0.3
CALCOCO1-218ENST00000550804 A0A075B6Q4 140 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 OR2W5A6NFC9 320 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 TMEM221A6NGB7 291 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 DUXAA6NLW8 204 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 SURF4O15260 269 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 TNFSF14O43557 240 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 HTR2AP28223 471 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 SSTR4P31391 388 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 RAB40BQ12829 278 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 C1orf61Q13536 156 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 KIR2DS3Q14952 304 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 CRTC2Q53ET0 693 aaPredicted RBP13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 KLHL22Q53GT1 634 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 SLC35F1Q5T1Q4 408 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 SMARCD3Q6STE5 483 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 DGAT2L6Q6ZPD8 337 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 ZAR1Q86SH2 424 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 MRGPREQ86SM8 312 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 TRIM48Q8IWZ4 208 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 PFN4Q8NHR9 129 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 HMGB4Q8WW32 186 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 SLC35B4Q969S0 331 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 MED20Q9H944 212 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 ABCB9Q9NP78 766 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 HRASLS2Q9NWW9 162 aa13.19□□□□□ -0.3
CALCOCO1-218ENST00000550804 NTMQ9P121 344 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms