RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 OR2A14Q96R47 310 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 SLC46A2Q9BY10 475 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 SRRQ9GZT4 340 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 NUBP2Q9Y5Y2 271 aa9.62□□□□□ -0.87
SMARCC2-209ENST00000550164 NPIPA5A0A0B4J1W7 369 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 A0A0G2JMP0 313 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 A0A0X1KG70 313 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 NPIPA7E9PJI5 369 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 ARPC1BO15143 372 aaKnown RBP9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 PRKRAO75569 313 aaKnown RBP9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 SLCO2B1O94956 709 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 NPIPA8P0DM63 369 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 GTF2F2P13984 249 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 NTHL1P78549 312 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 PUM1Q14671 1186 aaKnown RBP eCLIP9.61□□□□□ -0.871e-6■■■□□ 15.5
SMARCC2-209ENST00000550164 FAM71E1Q6IPT2 247 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 PARS2Q7L3T8 475 aaKnown RBP9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 ARMC10Q8N2F6 343 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 LRRC25Q8N386 305 aaPredicted RBP9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 OR4M2Q8NGB6 313 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 OR56A3Q8NH54 315 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 CCDC107Q8WV48 283 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 SLC25A36Q96CQ1 311 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 C4orf36Q96KX1 117 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 OR52D1Q9H346 318 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 C14orf105Q9NVL8 296 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 TAS2R3Q9NYW6 316 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 FBXL3Q9UKT7 428 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 ACSL5Q9ULC5 683 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 A0A1B0GVI7 797 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 TRAPPC13A5PLN9 417 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 POM121CA8CG34 1229 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 FAM171A2A8MVW0 826 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 CLDN4O14493 209 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 CASC3O15234 703 aaKnown RBP9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 SLC43A1O75387 559 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 ILF3Q12906 894 aaKnown RBP eCLIP9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 CCNJQ5T5M9 372 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 TCTN3Q6NUS6 607 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 LYPD4Q6UWN0 246 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 LRRN1Q6UXK5 716 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 GALNTL5Q7Z4T8 443 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 JAGN1Q8N5M9 183 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 APH1BQ8WW43 257 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 NSMAFQ92636 917 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 NEURL3Q96EH8 262 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 DHRS1Q96LJ7 313 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 ZNF471Q9BX82 626 aaPredicted RBP9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 DPEP2Q9H4A9 486 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 METTL17Q9H7H0 456 aaPredicted RBP9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 C1GALT1Q9NS00 363 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 TMPRSS11EQ9UL52 423 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 ANKRD31Q8N7Z5 1873 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 QSER1Q2KHR3 1735 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 SOCS6O14544 535 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 FZD6O60353 706 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 ADAMTS4O75173 837 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 WISP3O95389 354 aaPredicted RBP9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 ZDHHC11BP0C7U3 371 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 TRAPPC2P0DI81 140 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 TRAPPC2BP0DI82 140 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 SNRPBP14678 240 aaKnown RBP9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 TSPAN31Q12999 210 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 ESCO2Q56NI9 601 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 ENTPD8Q5MY95 495 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 METAP1DQ6UB28 335 aaPredicted RBP9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 FAM198BQ6UWH4 519 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 LCTLQ6UWM7 567 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 HTR3DQ70Z44 454 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 KLHDC8BQ8IXV7 354 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 NRSN1Q8IZ57 195 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 GATSQ8NAP1 163 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 CREB3L4Q8TEY5 395 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 HS6ST2Q96MM7 605 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 KATNB1Q9BVA0 655 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 SLC25A18Q9H1K4 315 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 MTHFD2LQ9H903 347 aaPredicted RBP9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 SRA1Q9HD15 236 aaKnown RBP9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 NDUFB11Q9NX14 153 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 PLEKHA6Q9Y2H5 1048 aa9.61□□□□□ -0.87
SMARCC2-209ENST00000550164 COL4A5P29400 1685 aa9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 OR52A4PA6NMU1 304 aa9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 NARSO43776 548 aaKnown RBP9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 RAB28P51157 221 aa9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 POU6F2P78424 691 aaPredicted RBP9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 ELAVL3Q14576 367 aaKnown RBP9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 PDGFRLQ15198 375 aa9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 TMEM35AQ53FP2 167 aa9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 CREB3L2Q70SY1 520 aa9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 PRSS58Q8IYP2 241 aa9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 SDR16C5Q8N3Y7 309 aa9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 ACOT4Q8N9L9 421 aa9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 INO80EQ8NBZ0 244 aaPredicted RBP9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 NLGN4YQ8NFZ3 816 aaPredicted RBP9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 OR5J2Q8NH18 312 aa9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 RIT1Q92963 219 aa9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 SLC22A18Q96BI1 424 aa9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 ACTRT3Q9BYD9 372 aa9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 SLC52A3Q9NQ40 469 aa9.6□□□□□ -0.87
SMARCC2-209ENST00000550164 DOCK1Q14185 1865 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms