RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 C16orf52Q8NHV5 167 aa5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 SLC22A8Q8TCC7 542 aa5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 JADE3Q92613 823 aa5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 TMEM125Q96AQ2 219 aa5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 OTUB1Q96FW1 271 aaPredicted RBP5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 JSRP1Q96MG2 331 aaPredicted RBP5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 RASL10BQ96S79 203 aa5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 CCT7Q99832 543 aa5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 ITPAQ9BY32 194 aa5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 DPY30Q9C005 99 aa5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 WWTR1Q9GZV5 400 aa5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 GLIPR2Q9H4G4 154 aa5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 REEP4Q9H6H4 257 aa5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 ASF1BQ9NVP2 202 aa5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 HPF1Q9NWY4 346 aa5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 EXO1Q9UQ84 846 aaKnown RBP5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 NTNG1Q9Y2I2 539 aa5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 YARS2Q9Y2Z4 477 aaKnown RBP5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 TMED5Q9Y3A6 229 aa5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 SNX8Q9Y5X2 465 aa5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 COPG1Q9Y678 874 aaKnown RBP5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 BSNQ9UPA5 3926 aa5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 SMG1Q96Q15 3661 aaKnown RBP5.41□□□□□ -1.54
EFCAB2-215ENST00000549220 BAHCC1Q9P281 2608 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 SPTBN1Q01082 2364 aaKnown RBP5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 A0A0G2JMM0 328 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 A0A1W2PPB8 328 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 A0A1W2PRS3 328 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 SYNDIG1LA6NDD5 238 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 TMEM200CA6NKL6 621 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 KIR3DP1A8MWS1 328 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 TCP11X1B4DZS4 312 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 E9PBE3 544 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 HDAC3O15379 428 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 ZNHIT1O43257 154 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 CDC40O60508 579 aaKnown RBP eCLIP5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 ZNF354AO60765 605 aaPredicted RBP5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 FZD7O75084 574 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 VPS4BO75351 444 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 SORBS2O94875 1100 aaKnown RBP5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 RASAL1O95294 804 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 CPSF4O95639 269 aaKnown RBP5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 CLPSP04118 112 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 IGKV3-11P04433 115 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 ATP1B1P05026 303 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 LAMP1P11279 417 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 PRPS2P11908 318 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 PLA2G2AP14555 144 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 GPX3P22352 226 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 GSTM5P46439 218 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 UQCRFS1P47985 274 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 DNASE1L1P49184 302 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 MEOX1P50221 254 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 HLCSP50747 726 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 CDK9P50750 372 aaKnown RBP5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 SLC18A1P54219 525 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 CASP9P55211 416 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 SLC37A1P57057 533 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 FBXW4P57775 412 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 PLGLB1Q02325 96 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 MAD2L1Q13257 205 aaPredicted RBP5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 BIKQ13323 160 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 FOXE3Q13461 319 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 NFYCQ13952 458 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 EBPQ15125 230 aaKnown RBP5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 SPDYE7PQ495Y7 208 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 ZNF628Q5EBL2 1059 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 CPTPQ5TA50 214 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 TMEM198Q66K66 360 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 OR4F3Q6IEY1 312 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 SLC25A25Q6KCM7 469 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 IGFL2Q6UWQ7 119 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 IGFL3Q6UXB1 125 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 Q6ZS92 163 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 IKBIPQ70UQ0 350 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 MDGA2Q7Z553 956 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 R3HCC1LQ7Z5L2 792 aaKnown RBP5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 GALNT10Q86SR1 603 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 ANKRD46Q86W74 232 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 HPS6Q86YV9 775 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 SLC44A2Q8IWA5 706 aaPredicted RBP5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 TAGAPQ8N103 731 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 CPSF7Q8N684 471 aaKnown RBP5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 HORMAD2Q8N7B1 307 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 TMEM178AQ8NBL3 297 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 OR5AK3PQ8NH89 298 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 ZFP28Q8NHY6 868 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 FAM76AQ8TAV0 307 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 RAB3IL1Q8TBN0 382 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 GRHL3Q8TE85 626 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 HAS2Q92819 552 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 SNRNP40Q96DI7 357 aaKnown RBP5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 C11orf24Q96F05 449 aaPredicted RBP5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 ZNF681Q96N22 645 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 AMDHD1Q96NU7 426 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 LRRC37BQ96QE4 947 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 OR52B2Q96RD2 323 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 MEAF6Q9HAF1 191 aa5.4□□□□□ -1.54
EFCAB2-215ENST00000549220 FOLH1BQ9HBA9 442 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms