RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 KIR2DL2P43627 348 aaPredicted RBP7.63□□□□□ -1.19
USP28-215ENST00000545608 CLDN20P56880 219 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 PSPHP78330 225 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 MRPS22P82650 360 aaKnown RBP7.63□□□□□ -1.19
USP28-215ENST00000545608 ZNF763Q0D2J5 394 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 STX5Q13190 355 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 SLC29A2Q14542 456 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 FAM153CQ494X1 144 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 CYP27C1Q4G0S4 372 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 TRMT10CQ7L0Y3 403 aaKnown RBP7.63□□□□□ -1.19
USP28-215ENST00000545608 CHMP1BQ7LBR1 199 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 MARCH3Q86UD3 253 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 LCA5Q86VQ0 697 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 CXorf67Q86X51 503 aaPredicted RBP7.63□□□□□ -1.19
USP28-215ENST00000545608 GOLGA6L1Q8N7Z2 621 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 CNEP1R1Q8N9A8 125 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 ACMSDQ8TDX5 336 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 DUSP19Q8WTR2 217 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 SMPDL3BQ92485 455 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 ELP4Q96EB1 424 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 DTNBP1Q96EV8 351 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 OPN3Q9H1Y3 402 aaPredicted RBP7.63□□□□□ -1.19
USP28-215ENST00000545608 TNFRSF12AQ9NP84 129 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 TAS2R7Q9NYW3 318 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 C6orf203Q9P0P8 240 aaPredicted RBP7.63□□□□□ -1.19
USP28-215ENST00000545608 SENP1Q9P0U3 644 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 NDRG3Q9UGV2 375 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 GRID1Q9ULK0 1009 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 STK38LQ9Y2H1 464 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 TESMINQ9Y4I5 508 aa7.63□□□□□ -1.19
USP28-215ENST00000545608 POLR3HQ9Y535 204 aaPredicted RBP7.63□□□□□ -1.19
USP28-215ENST00000545608 GXYLT2A0PJZ3 443 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 OR2M5A3KFT3 312 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 CCDC151A5D8V7 595 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 DEFB108AA8MXU0 73 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 SHISA8B8ZZ34 492 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 SEC14L5O43304 696 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 ATP8B1O43520 1251 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 PSMG1O95456 288 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 IL33O95760 270 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 CGAP01215 116 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 IGKV1D-16P01601 117 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 GSTA1P08263 222 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 BMP4P12644 408 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 GABRA3P34903 492 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 CD79BP40259 229 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 GSTM5P46439 218 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 RFX3P48380 749 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 PCYT1AP49585 367 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 SIRPAP78324 504 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 NKX6-1P78426 367 aaPredicted RBP7.62□□□□□ -1.19
USP28-215ENST00000545608 KIAA0040Q15053 153 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 DECR1Q16698 335 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 IMPG1Q17R60 797 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 RAET1LQ5VY80 246 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 OR2A2Q6IF42 318 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 NOXRED1Q6NXP6 359 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 APOOLQ6UXV4 268 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 ZYG11AQ6WRX3 759 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 C22orf34Q6ZV56 151 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 SH2D5Q6ZV89 423 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 Q71RC1 249 aaPredicted RBP7.62□□□□□ -1.19
USP28-215ENST00000545608 SYT9Q86SS6 491 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 OR2L13Q8N349 312 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 ZNF610Q8N9Z0 462 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 PGM2Q96G03 612 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 ZNF845Q96IR2 970 aaPredicted RBP7.62□□□□□ -1.19
USP28-215ENST00000545608 C18orf12Q96KH6 178 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 EGLN2Q96KS0 407 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 AMDHD1Q96NU7 426 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 FAM111AQ96PZ2 611 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 LMF2Q9BU23 707 aaKnown RBP7.62□□□□□ -1.19
USP28-215ENST00000545608 PINK1Q9BXM7 581 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 TXLNGYQ9BZA5 131 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 SHCBP1LQ9BZQ2 653 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 RASSF4Q9H2L5 321 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 MYNNQ9NPC7 610 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 MIEF1Q9NQG6 463 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 SDHAF3Q9NRP4 125 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 DDX18Q9NVP1 670 aaKnown RBP7.62□□□□□ -1.19
USP28-215ENST00000545608 BEX4Q9NWD9 120 aaPredicted RBP7.62□□□□□ -1.19
USP28-215ENST00000545608 KLHL28Q9NXS3 571 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 PSMC3IPQ9P2W1 217 aaPredicted RBP7.62□□□□□ -1.19
USP28-215ENST00000545608 TBK1Q9UHD2 729 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 DCDC2Q9UHG0 476 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 EIF3LQ9Y262 564 aaKnown RBP7.62□□□□□ -1.19
USP28-215ENST00000545608 CCL27Q9Y4X3 112 aa7.62□□□□□ -1.19
USP28-215ENST00000545608 MED12LQ86YW9 2145 aa7.61□□□□□ -1.19
USP28-215ENST00000545608 H3BML4 177 aa7.61□□□□□ -1.19
USP28-215ENST00000545608 EMC8O43402 210 aa7.61□□□□□ -1.19
USP28-215ENST00000545608 GMFGO60234 142 aa7.61□□□□□ -1.19
USP28-215ENST00000545608 SLITRK5O94991 958 aa7.61□□□□□ -1.19
USP28-215ENST00000545608 SLU7O95391 586 aaKnown RBP7.61□□□□□ -1.19
USP28-215ENST00000545608 UTS2O95399 124 aa7.61□□□□□ -1.19
USP28-215ENST00000545608 PROCP04070 461 aa7.61□□□□□ -1.19
USP28-215ENST00000545608 INHBBP09529 407 aa7.61□□□□□ -1.19
USP28-215ENST00000545608 MYL2P10916 166 aa7.61□□□□□ -1.19
USP28-215ENST00000545608 POU2F1P14859 743 aa7.61□□□□□ -1.19
USP28-215ENST00000545608 CRYGSP22914 178 aa7.61□□□□□ -1.19
USP28-215ENST00000545608 NTSP30990 170 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms