RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 ZAR1Q86SH2 424 aa19.06■□□□□ 0.64
SCARB1-210ENST00000545493 EXOC3L1Q86VI1 746 aa19.06■□□□□ 0.64
SCARB1-210ENST00000545493 GPR151Q8TDV0 419 aa19.06■□□□□ 0.64
SCARB1-210ENST00000545493 DUSP19Q8WTR2 217 aa19.06■□□□□ 0.64
SCARB1-210ENST00000545493 FIG4Q92562 907 aa19.06■□□□□ 0.64
SCARB1-210ENST00000545493 OTUB1Q96FW1 271 aaPredicted RBP19.06■□□□□ 0.64
SCARB1-210ENST00000545493 TBL1XR1Q9BZK7 514 aa19.06■□□□□ 0.64
SCARB1-210ENST00000545493 SDHAF3Q9NRP4 125 aa19.06■□□□□ 0.64
SCARB1-210ENST00000545493 CCM2LQ9NUG4 571 aaPredicted RBP19.06■□□□□ 0.64
SCARB1-210ENST00000545493 PACSIN3Q9UKS6 424 aa19.06■□□□□ 0.64
SCARB1-210ENST00000545493 ZNF337Q9Y3M9 751 aa19.06■□□□□ 0.64
SCARB1-210ENST00000545493 PRRC2AP48634 2157 aaKnown RBP19.06■□□□□ 0.64
SCARB1-210ENST00000545493 ITPR3Q14573 2671 aa19.06■□□□□ 0.64
SCARB1-210ENST00000545493 SLC22A20A6NK97 555 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 H3BML4 177 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 GMFGO60234 142 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 OXSR1O95747 527 aaPredicted RBP19.05■□□□□ 0.64
SCARB1-210ENST00000545493 EPXP11678 715 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 ASMTP46597 345 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 CLDN20P56880 219 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 IFFO1Q0D2I5 559 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 PTGR1Q14914 329 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 DUSP5Q16690 384 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 VWA1Q6PCB0 445 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 MEIOBQ8N635 442 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 SLC16A11Q8NCK7 471 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 SLC9A6Q92581 669 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 MTERF3Q96E29 417 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 FAM120BQ96EK7 910 aaKnown RBP19.05■□□□□ 0.64
SCARB1-210ENST00000545493 C3orf30Q96M34 536 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 CXXC4Q9H2H0 198 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 PIGMQ9H3S5 423 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 PTGES2Q9H7Z7 377 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 EML4Q9HC35 981 aaKnown RBP19.05■□□□□ 0.64
SCARB1-210ENST00000545493 ATP6V1HQ9UI12 483 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 PLEKHA6Q9Y2H5 1048 aa19.05■□□□□ 0.64
SCARB1-210ENST00000545493 ALG1L2C9J202 215 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 CPOXP36551 454 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 HPCAL1P37235 193 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 ETV4P43268 484 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 CLK3P49761 638 aaKnown RBP19.04■□□□□ 0.64
SCARB1-210ENST00000545493 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.04■□□□□ 0.64
SCARB1-210ENST00000545493 TMEM44Q2T9K0 475 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 VPS26BQ4G0F5 336 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 EMBQ6PCB8 327 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 FIGNL1Q6PIW4 674 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 PAMR1Q6UXH9 720 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 P4HA3Q7Z4N8 544 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 OR6Y1Q8NGX8 325 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 CEP70Q8NHQ1 597 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 FAM110BQ8TC76 370 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 CAVIN3Q969G5 261 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 C16orf58Q96GQ5 468 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 ZNF845Q96IR2 970 aaPredicted RBP19.04■□□□□ 0.64
SCARB1-210ENST00000545493 PPP3R2Q96LZ3 170 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 FOXC2Q99958 501 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 PIGQQ9BRB3 760 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 C1orf50Q9BV19 199 aa19.04■□□□□ 0.64
SCARB1-210ENST00000545493 ROPN1BQ9BZX4 212 aaPredicted RBP19.04■□□□□ 0.64
SCARB1-210ENST00000545493 ROPN1Q9HAT0 212 aaPredicted RBP19.04■□□□□ 0.64
SCARB1-210ENST00000545493 A8MXE2 369 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 EMC8O43402 210 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 TYROBPO43914 113 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 PEX11AO75192 247 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 SKAP2O75563 359 aaPredicted RBP19.03■□□□□ 0.64
SCARB1-210ENST00000545493 KCNK2O95069 426 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 NGFRP08138 427 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 SERPINB5P36952 375 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 C17orf67Q0P5P2 114 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 MLC1Q15049 377 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 R3HCC1LQ7Z5L2 792 aaKnown RBP19.03■□□□□ 0.64
SCARB1-210ENST00000545493 GGNQ86UU5 652 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 METTL25Q8N6Q8 603 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 GATSQ8NAP1 163 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 OR7A2PQ8NGA2 310 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 NUDT8Q8WV74 236 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 SMPDL3BQ92485 455 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 STARD4Q96DR4 205 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 KLHDC3Q9BQ90 382 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 PINK1Q9BXM7 581 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 FBXO34Q9NWN3 711 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.03■□□□□ 0.643e-10■□□□□ 8.4
SCARB1-210ENST00000545493 ZDHHC2Q9UIJ5 367 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 VDAC3Q9Y277 283 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 V9GYY5 206 aaPredicted RBP19.03■□□□□ 0.64
SCARB1-210ENST00000545493 MPDZO75970 2070 aa19.03■□□□□ 0.64
SCARB1-210ENST00000545493 C2CD3Q4AC94 2353 aa19.02■□□□□ 0.64
SCARB1-210ENST00000545493 TMEM114B3SHH9 223 aa19.02■□□□□ 0.64
SCARB1-210ENST00000545493 BPGMP07738 259 aa19.02■□□□□ 0.64
SCARB1-210ENST00000545493 LAMP1P11279 417 aa19.02■□□□□ 0.64
SCARB1-210ENST00000545493 MAPK1P28482 360 aa19.02■□□□□ 0.64
SCARB1-210ENST00000545493 CCKARP32238 428 aa19.02■□□□□ 0.64
SCARB1-210ENST00000545493 CCNJQ5T5M9 372 aa19.02■□□□□ 0.64
SCARB1-210ENST00000545493 OR2A2Q6IF42 318 aa19.02■□□□□ 0.64
SCARB1-210ENST00000545493 WDR93Q6P2C0 686 aa19.02■□□□□ 0.64
SCARB1-210ENST00000545493 LRIG3Q6UXM1 1119 aa19.02■□□□□ 0.64
SCARB1-210ENST00000545493 CNEP1R1Q8N9A8 125 aa19.02■□□□□ 0.64
SCARB1-210ENST00000545493 OR4C3Q8NH37 302 aa19.02■□□□□ 0.64
SCARB1-210ENST00000545493 GOT1L1Q8NHS2 421 aaPredicted RBP19.02■□□□□ 0.64
SCARB1-210ENST00000545493 FNDC9Q8TBE3 224 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms