RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 IRAK1BP1Q5VVH5 260 aa8.79□□□□□ -1
YBX3-215ENST00000544504 CYP2R1Q6VVX0 501 aa8.79□□□□□ -1
YBX3-215ENST00000544504 EIF3MQ7L2H7 374 aaKnown RBP8.79□□□□□ -1
YBX3-215ENST00000544504 SPPL2CQ8IUH8 684 aa8.79□□□□□ -1
YBX3-215ENST00000544504 ARMC8Q8IUR7 673 aa8.79□□□□□ -1
YBX3-215ENST00000544504 C9orf40Q8IXQ3 194 aa8.79□□□□□ -1
YBX3-215ENST00000544504 DND1Q8IYX4 353 aaKnown RBP8.79□□□□□ -1
YBX3-215ENST00000544504 SLC34A3Q8N130 599 aa8.79□□□□□ -1
YBX3-215ENST00000544504 ZNF619Q8N2I2 560 aa8.79□□□□□ -1
YBX3-215ENST00000544504 SLC5A8Q8N695 610 aa8.79□□□□□ -1
YBX3-215ENST00000544504 ANKFN1Q8N957 763 aa8.79□□□□□ -1
YBX3-215ENST00000544504 ZNF527Q8NB42 609 aa8.79□□□□□ -1
YBX3-215ENST00000544504 FBXO30Q8TB52 745 aa8.79□□□□□ -1
YBX3-215ENST00000544504 ELP5Q8TE02 316 aa8.79□□□□□ -1
YBX3-215ENST00000544504 DOK4Q8TEW6 326 aa8.79□□□□□ -1
YBX3-215ENST00000544504 WDR60Q8WVS4 1066 aa8.79□□□□□ -1
YBX3-215ENST00000544504 THAP4Q8WY91 577 aa8.79□□□□□ -1
YBX3-215ENST00000544504 MAL2Q969L2 176 aa8.79□□□□□ -1
YBX3-215ENST00000544504 ADIPOR1Q96A54 375 aa8.79□□□□□ -1
YBX3-215ENST00000544504 DUS3LQ96G46 650 aaKnown RBP8.79□□□□□ -1
YBX3-215ENST00000544504 RMND5BQ96G75 393 aaPredicted RBP8.79□□□□□ -1
YBX3-215ENST00000544504 ITPAQ9BY32 194 aa8.79□□□□□ -1
YBX3-215ENST00000544504 ZNF350Q9GZX5 532 aa8.79□□□□□ -1
YBX3-215ENST00000544504 SAP130Q9H0E3 1048 aa8.79□□□□□ -1
YBX3-215ENST00000544504 DCLRE1BQ9H816 532 aa8.79□□□□□ -1
YBX3-215ENST00000544504 ZNF71Q9NQZ8 489 aaPredicted RBP8.79□□□□□ -1
YBX3-215ENST00000544504 P4HTMQ9NXG6 502 aa8.79□□□□□ -1
YBX3-215ENST00000544504 KLHL28Q9NXS3 571 aa8.79□□□□□ -1
YBX3-215ENST00000544504 SEC14L3Q9UDX4 400 aa8.79□□□□□ -1
YBX3-215ENST00000544504 FBXL4Q9UKA2 621 aa8.79□□□□□ -1
YBX3-215ENST00000544504 SLC13A4Q9UKG4 626 aa8.79□□□□□ -1
YBX3-215ENST00000544504 GPC6Q9Y625 555 aaPredicted RBP8.79□□□□□ -1
YBX3-215ENST00000544504 DSPPQ9NZW4 1301 aa8.79□□□□□ -1
YBX3-215ENST00000544504 ZNF891A8MT65 544 aaPredicted RBP8.78□□□□□ -1
YBX3-215ENST00000544504 M0QX08 132 aa8.78□□□□□ -1
YBX3-215ENST00000544504 SORBS2O94875 1100 aaKnown RBP8.78□□□□□ -1
YBX3-215ENST00000544504 KCNK2O95069 426 aa8.78□□□□□ -1
YBX3-215ENST00000544504 IL33O95760 270 aa8.78□□□□□ -1
YBX3-215ENST00000544504 ZNF682O95780 498 aa8.78□□□□□ -1
YBX3-215ENST00000544504 SERPINA1P01009 418 aa8.78□□□□□ -1
YBX3-215ENST00000544504 C1QCP02747 245 aa8.78□□□□□ -1
YBX3-215ENST00000544504 SERPINA7P05543 415 aa8.78□□□□□ -1
YBX3-215ENST00000544504 DBIP07108 87 aaKnown RBP8.78□□□□□ -1
YBX3-215ENST00000544504 FCGR1AP12314 374 aa8.78□□□□□ -1
YBX3-215ENST00000544504 ELAVL4P26378 380 aaKnown RBP8.78□□□□□ -1
YBX3-215ENST00000544504 IL12BP29460 328 aa8.78□□□□□ -1
YBX3-215ENST00000544504 SLC7A1P30825 629 aa8.78□□□□□ -1
YBX3-215ENST00000544504 SOX11P35716 441 aa8.78□□□□□ -1
YBX3-215ENST00000544504 NR0B1P51843 470 aaKnown RBP8.78□□□□□ -1
YBX3-215ENST00000544504 PNLIPRP2P54317 469 aa8.78□□□□□ -1
YBX3-215ENST00000544504 SELENOWP63302 87 aa8.78□□□□□ -1
YBX3-215ENST00000544504 RPP38P78345 283 aaKnown RBP8.78□□□□□ -1
YBX3-215ENST00000544504 PLCXD2Q0VAA5 305 aa8.78□□□□□ -1
YBX3-215ENST00000544504 CCNIQ14094 377 aa8.78□□□□□ -1
YBX3-215ENST00000544504 EFR3AQ14156 821 aa8.78□□□□□ -1
YBX3-215ENST00000544504 EIPR1Q53HC9 387 aa8.78□□□□□ -1
YBX3-215ENST00000544504 CYBRD1Q53TN4 286 aa8.78□□□□□ -1
YBX3-215ENST00000544504 FKBP9P1Q75LS8 142 aa8.78□□□□□ -1
YBX3-215ENST00000544504 CBLL1Q75N03 491 aa8.78□□□□□ -1
YBX3-215ENST00000544504 ZNF441Q8N8Z8 693 aa8.78□□□□□ -1
YBX3-215ENST00000544504 SIMC1Q8NDZ2 872 aa8.78□□□□□ -1
YBX3-215ENST00000544504 FAM110BQ8TC76 370 aa8.78□□□□□ -1
YBX3-215ENST00000544504 ADAMTS17Q8TE56 1095 aa8.78□□□□□ -1
YBX3-215ENST00000544504 SSC4DQ8WTU2 575 aa8.78□□□□□ -1
YBX3-215ENST00000544504 PIK3R3Q92569 461 aa8.78□□□□□ -1
YBX3-215ENST00000544504 PROX1Q92786 737 aa8.78□□□□□ -1
YBX3-215ENST00000544504 PYURFQ96I23 114 aa8.78□□□□□ -1
YBX3-215ENST00000544504 COL21A1Q96P44 957 aa8.78□□□□□ -1
YBX3-215ENST00000544504 DOHHQ9BU89 302 aa8.78□□□□□ -1
YBX3-215ENST00000544504 PINK1Q9BXM7 581 aa8.78□□□□□ -1
YBX3-215ENST00000544504 NXF5Q9H1B4 397 aaKnown RBP8.78□□□□□ -1
YBX3-215ENST00000544504 SLC38A1Q9H2H9 487 aa8.78□□□□□ -1
YBX3-215ENST00000544504 ZNF160Q9HCG1 818 aa8.78□□□□□ -1
YBX3-215ENST00000544504 ATP13A2Q9NQ11 1180 aa8.78□□□□□ -1
YBX3-215ENST00000544504 CCM2LQ9NUG4 571 aaPredicted RBP8.78□□□□□ -1
YBX3-215ENST00000544504 GMPR2Q9P2T1 348 aaKnown RBP8.78□□□□□ -1
YBX3-215ENST00000544504 TEKT2Q9UIF3 430 aa8.78□□□□□ -1
YBX3-215ENST00000544504 USP22Q9UPT9 525 aa8.78□□□□□ -1
YBX3-215ENST00000544504 PCDHGA10Q9Y5H3 936 aa8.78□□□□□ -1
YBX3-215ENST00000544504 ZFHX3Q15911 3703 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 TCRBV5S2A0A599 114 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 GXYLT2A0PJZ3 443 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 OR6C70A6NIJ9 312 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 SYT5O00445 386 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 HNRNPRO43390 633 aaKnown RBP8.77□□□□□ -1.01
YBX3-215ENST00000544504 KIAA0513O60268 411 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 MGRN1O60291 552 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 ENTPD5O75356 428 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 REM1O75628 298 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 MFN2O95140 757 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 NGFRP08138 427 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 CHRM4P08173 479 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 RAP2AP10114 183 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 LIFP15018 202 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 HPGDP15428 266 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 ITGA2P17301 1181 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 POU3F2P20265 443 aaPredicted RBP8.77□□□□□ -1.01
YBX3-215ENST00000544504 F8A1P23610 371 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 AQP1P29972 269 aa8.77□□□□□ -1.01
YBX3-215ENST00000544504 PRKAR1BP31321 381 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms