RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 CBR3O75828 277 aa17.42■□□□□ 0.38
DDX55-211ENST00000544429 ZIC2O95409 532 aaPredicted RBP17.42■□□□□ 0.38
DDX55-211ENST00000544429 AGR2O95994 175 aa17.42■□□□□ 0.38
DDX55-211ENST00000544429 GDF1P27539 372 aa17.42■□□□□ 0.38
DDX55-211ENST00000544429 CHI3L1P36222 383 aaPredicted RBP17.42■□□□□ 0.38
DDX55-211ENST00000544429 CA7P43166 264 aa17.42■□□□□ 0.38
DDX55-211ENST00000544429 RFX3P48380 749 aa17.42■□□□□ 0.38
DDX55-211ENST00000544429 RBPJQ06330 500 aa17.42■□□□□ 0.38
DDX55-211ENST00000544429 GTDC1Q4AE62 458 aa17.42■□□□□ 0.38
DDX55-211ENST00000544429 PAGE3Q5JUK9 113 aa17.42■□□□□ 0.38
DDX55-211ENST00000544429 RNF130Q86XS8 419 aa17.42■□□□□ 0.38
DDX55-211ENST00000544429 NEIL3Q8TAT5 605 aa17.42■□□□□ 0.38
DDX55-211ENST00000544429 CHMP6Q96FZ7 201 aa17.42■□□□□ 0.38
DDX55-211ENST00000544429 ZNF350Q9GZX5 532 aa17.42■□□□□ 0.38
DDX55-211ENST00000544429 FAM53CQ9NYF3 392 aa17.42■□□□□ 0.38
DDX55-211ENST00000544429 FBXL2Q9UKC9 423 aa17.42■□□□□ 0.38
DDX55-211ENST00000544429 MRPS18CQ9Y3D5 142 aaKnown RBP17.42■□□□□ 0.38
DDX55-211ENST00000544429 PCDHB14Q9Y5E9 798 aa17.42■□□□□ 0.38
DDX55-211ENST00000544429 COL12A1Q99715 3063 aa17.42■□□□□ 0.38
DDX55-211ENST00000544429 MED12Q93074 2177 aa17.42■□□□□ 0.38
DDX55-211ENST00000544429 A0A096LPI6 279 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 WIPF3A6NGB9 483 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 NR5A2O00482 541 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 ZNHIT1O43257 154 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 CDC40O60508 579 aaKnown RBP eCLIP17.41■□□□□ 0.38
DDX55-211ENST00000544429 SEMA7AO75326 666 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 PDE9AO76083 593 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 OR12D1P0DN82 309 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 KHKP50053 298 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 CASP9P55211 416 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 C4orf17Q53FE4 359 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 KLHL26Q53HC5 615 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 EMC4Q5J8M3 183 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 COX20Q5RI15 118 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 TNFAIP8L2Q6P589 184 aaPredicted RBP17.41■□□□□ 0.38
DDX55-211ENST00000544429 DNAJC14Q6Y2X3 702 aaPredicted RBP17.41■□□□□ 0.38
DDX55-211ENST00000544429 MARCH3Q86UD3 253 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 MSRB3Q8IXL7 192 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 OR2M3Q8NG83 312 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 FAM57AQ8TBR7 257 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 OR2B2Q9GZK3 357 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 NMUR2Q9GZQ4 415 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 SAP130Q9H0E3 1048 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 TPT1P8Q9HAU6 139 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 SAR1AQ9NR31 198 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 SLC25A37Q9NYZ2 338 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 SLAMF8Q9P0V8 285 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 SPRR3Q9UBC9 169 aa17.41■□□□□ 0.38
DDX55-211ENST00000544429 ERRFI1Q9UJM3 462 aaPredicted RBP17.41■□□□□ 0.38
DDX55-211ENST00000544429 NCOA6Q14686 2063 aaPredicted RBP17.41■□□□□ 0.38
DDX55-211ENST00000544429 TRGV5A0A0B4J1U4 118 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 SCO2O43819 266 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 ANGPTL1O95841 491 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 LSP1P33241 339 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 PTGS2P35354 604 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 C17orf67Q0P5P2 114 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 NHSL2Q5HYW2 709 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.4■□□□□ 0.38
DDX55-211ENST00000544429 DOLPP1Q86YN1 238 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 FAM26EQ8N5C1 309 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 FAM83FQ8NEG4 500 aaPredicted RBP17.4■□□□□ 0.38
DDX55-211ENST00000544429 RAB8BQ92930 207 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 TBL1XR1Q9BZK7 514 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 HOXD1Q9GZZ0 328 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 SLC6A15Q9H2J7 730 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 POLE3Q9NRF9 147 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 SDHAF3Q9NRP4 125 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 MRGBPQ9NV56 204 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 EXD2Q9NVH0 621 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 KCNE5Q9UJ90 142 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 SLC5A6Q9Y289 635 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 DOPEY1Q5JWR5 2465 aa17.4■□□□□ 0.38
DDX55-211ENST00000544429 PHF3Q92576 2039 aaKnown RBP17.39■□□□□ 0.37
DDX55-211ENST00000544429 ZIC3O60481 467 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 FCMRO60667 390 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 STX11O75558 287 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 KRT75O95678 551 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 SRD5A2P31213 254 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 DCTP40126 519 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 CLK3P49761 638 aaKnown RBP17.39■□□□□ 0.37
DDX55-211ENST00000544429 SEC24CP53992 1094 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 ATP12AP54707 1039 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 GYS2P54840 703 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 MAPK11Q15759 364 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 C3AR1Q16581 482 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 C6orf10Q5SRN2 563 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 OR5M10Q6IEU7 315 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 DLEU7Q6UYE1 221 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 DPP10Q8N608 796 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 DUSP19Q8WTR2 217 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 XAGE5Q8WWM1 108 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 OIT3Q8WWZ8 545 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 ROPN1LQ96C74 230 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 AURKBQ96GD4 344 aaPredicted RBP17.39■□□□□ 0.37
DDX55-211ENST00000544429 PPP4R1LQ9P1A2 415 aa17.39■□□□□ 0.37
DDX55-211ENST00000544429 HEATR5AQ86XA9 2040 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 PCNX1Q96RV3 2341 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 A0A1B0GUH1 482 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 BCKDKO14874 412 aa17.38■□□□□ 0.37
DDX55-211ENST00000544429 KIAA0513O60268 411 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms