RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 CD8B2A6NJW9 211 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 DUXAA6NLW8 204 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 NOS1APO75052 506 aaPredicted RBP12.82□□□□□ -0.36
VPS33A-208ENST00000543633 RFPL3O75679 317 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 CD8BP10966 210 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 M6PRP20645 277 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 ATP5A1P25705 553 aaKnown RBP12.82□□□□□ -0.36
VPS33A-208ENST00000543633 MPIP34949 423 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 ATP6V1E1P36543 226 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 CTBP2P56545 445 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 CSTF1Q05048 431 aaKnown RBP12.82□□□□□ -0.36
VPS33A-208ENST00000543633 FNDC3BQ53EP0 1204 aaKnown RBP12.82□□□□□ -0.36
VPS33A-208ENST00000543633 EIPR1Q53HC9 387 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 TMEM240Q5SV17 173 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 PYHIN1Q6K0P9 492 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 HEPHL1Q6MZM0 1159 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 RPL13AP3Q6NVV1 102 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 NIPAL3Q6P499 406 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 C16orf62Q7Z3J2 963 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 VRK2Q86Y07 508 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 LINC01555Q8NAE3 123 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 NUP43Q8NFH3 380 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 OR2L5Q8NG80 312 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 OR4M1Q8NGD0 313 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 OR2L8Q8NGY9 312 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 MS4A6EQ96DS6 147 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 SLC41A3Q96GZ6 507 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 WACQ9BTA9 647 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 HDAC8Q9BY41 377 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 CACYBPQ9HB71 228 aaKnown RBP12.82□□□□□ -0.36
VPS33A-208ENST00000543633 GALNT9Q9HCQ5 603 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 HINT3Q9NQE9 182 aaKnown RBP12.82□□□□□ -0.36
VPS33A-208ENST00000543633 LYARQ9NX58 379 aaKnown RBP12.82□□□□□ -0.36
VPS33A-208ENST00000543633 NTMQ9P121 344 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 ING4Q9UNL4 249 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 HSPB11Q9Y547 144 aa12.82□□□□□ -0.36
VPS33A-208ENST00000543633 A0A1W2PR48 441 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 CHP2O43745 196 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 ERAL1O75616 437 aaKnown RBP12.81□□□□□ -0.36
VPS33A-208ENST00000543633 AIFM1O95831 613 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 PAICSP22234 425 aaKnown RBP12.81□□□□□ -0.36
VPS33A-208ENST00000543633 TEAD1P28347 426 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 TRHRP34981 398 aaPredicted RBP12.81□□□□□ -0.36
VPS33A-208ENST00000543633 GCGRP47871 477 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 PITPNBP48739 271 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 RAB28P51157 221 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 AGFG1P52594 562 aaKnown RBP12.81□□□□□ -0.36
VPS33A-208ENST00000543633 AP2S1P53680 142 aaPredicted RBP12.81□□□□□ -0.36
VPS33A-208ENST00000543633 RAG2P55895 527 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 CDK3Q00526 305 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 ESCO2Q56NI9 601 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 C6orf132Q5T0Z8 1188 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 PIP5KL1Q5T9C9 394 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 CD276Q5ZPR3 534 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 ABHD17CQ6PCB6 329 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 OLIG3Q7RTU3 272 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 GDF7Q7Z4P5 450 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 ADGRD2Q7Z7M1 963 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 SIRT6Q8N6T7 355 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 LRRC17Q8N6Y2 441 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 OR4M2Q8NGB6 313 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 OR2A1Q8NGT9 310 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 GANCQ8TET4 914 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 ELP4Q96EB1 424 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 MCHR1Q99705 422 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 C7orf50Q9BRJ6 194 aaKnown RBP12.81□□□□□ -0.36
VPS33A-208ENST00000543633 YIPF4Q9BSR8 244 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 C1QTNF2Q9BXJ5 285 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 PRDM7Q9NQW5 492 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 ZNF275Q9NSD4 429 aaPredicted RBP12.81□□□□□ -0.36
VPS33A-208ENST00000543633 CHST2Q9Y4C5 530 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 NUBP2Q9Y5Y2 271 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 CACNG2Q9Y698 323 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 IGKV1-8A0A0C4DH67 115 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 C2orf92A0A1B0GVN3 265 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 C1QTNF3-AMACRE9PGA6 284 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 PEPDP12955 493 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 STOMP27105 288 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 WEE1P30291 646 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 EVI2BP34910 448 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 THBS2P35442 1172 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 MLLT1Q03111 559 aaPredicted RBP12.81□□□□□ -0.36
VPS33A-208ENST00000543633 GALEQ14376 348 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 IDNKQ5T6J7 187 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 ANKRD54Q6NXT1 300 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 BAIAP2L2Q6UXY1 529 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 MEPCEQ7L2J0 689 aaKnown RBP12.81□□□□□ -0.36
VPS33A-208ENST00000543633 NKAIN4Q8IVV8 208 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 NRMQ8IXM6 262 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 ETFBKMTQ8IXQ9 262 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 RNF113BQ8IZP6 322 aaKnown RBP12.81□□□□□ -0.36
VPS33A-208ENST00000543633 ACOT4Q8N9L9 421 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 TEX19Q8NA77 164 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 OR5H6Q8NGV6 325 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 OR2M2Q96R28 347 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 THAP7Q9BT49 309 aaPredicted RBP12.81□□□□□ -0.36
VPS33A-208ENST00000543633 ALG8Q9BVK2 526 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 MED28Q9H204 178 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 UBQLN3Q9H347 655 aa12.81□□□□□ -0.36
VPS33A-208ENST00000543633 DPAGT1Q9H3H5 408 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms