RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 CDK6Q00534 326 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 C17orf67Q0P5P2 114 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 VEZF1Q14119 521 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 ZNF141Q15928 474 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 HYAL4Q2M3T9 481 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 NADK2Q4G0N4 442 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 CCNJQ5T5M9 372 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 INTS11Q5TA45 600 aaKnown RBP11.16□□□□□ -0.62
DDX55-210ENST00000543016 TYW3Q6IPR3 259 aaKnown RBP11.16□□□□□ -0.62
DDX55-210ENST00000543016 REEP3Q6NUK4 255 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 BNC2Q6ZN30 1099 aaPredicted RBP11.16□□□□□ -0.62
DDX55-210ENST00000543016 GALNTL5Q7Z4T8 443 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 CALHM3Q86XJ0 350 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 KRT73Q86Y46 540 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 SULF2Q8IWU5 870 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 CMIPQ8IY22 773 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 ARHGAP24Q8N264 748 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 ZFP62Q8NB50 900 aaPredicted RBP11.16□□□□□ -0.62
DDX55-210ENST00000543016 HIPK4Q8NE63 616 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 TNIP2Q8NFZ5 429 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 OR2M7Q8NG81 312 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 BBS10Q8TAM1 723 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 GRHL3Q8TE85 626 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 OTUB1Q96FW1 271 aaPredicted RBP11.16□□□□□ -0.62
DDX55-210ENST00000543016 REXO5Q96IC2 774 aaKnown RBP11.16□□□□□ -0.62
DDX55-210ENST00000543016 NODALQ96S42 347 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 DOHHQ9BU89 302 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 SPATA5L1Q9BVQ7 753 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 OSBPL11Q9BXB4 747 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 C1orf21Q9H246 121 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 KLHL1Q9NR64 748 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 QPCTLQ9NXS2 382 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 B4GALT7Q9UBV7 327 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 ANGPT4Q9Y264 503 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 DTNAQ9Y4J8 743 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 CSAG2Q9Y5P2 127 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 FAM208BQ5VWN6 2430 aa11.16□□□□□ -0.62
DDX55-210ENST00000543016 COL6A6A6NMZ7 2263 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 ZZEF1O43149 2961 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 IGLV3-32A0A0A0MS00 114 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 PRAMEF27A3QJZ7 478 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 B2RBV5 119 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 ACOT7O00154 380 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 NDUFB5O43674 189 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 FCMRO60667 390 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 TRIM3O75382 744 aaPredicted RBP11.15□□□□□ -0.62
DDX55-210ENST00000543016 PDE9AO76083 593 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 SORBS2O94875 1100 aaKnown RBP11.15□□□□□ -0.62
DDX55-210ENST00000543016 CBX6O95503 412 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 OXSR1O95747 527 aaPredicted RBP11.15□□□□□ -0.62
DDX55-210ENST00000543016 C1QCP02747 245 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 DBIP07108 87 aaKnown RBP11.15□□□□□ -0.62
DDX55-210ENST00000543016 DCTP40126 519 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 MASP1P48740 699 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 RASSF2P50749 326 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 EEFSECP57772 596 aaKnown RBP11.15□□□□□ -0.62
DDX55-210ENST00000543016 MXRA7P84157 204 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 FUT5Q11128 374 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 ADRM1Q16186 407 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 SYPL1Q16563 259 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 GRAMD1BQ3KR37 738 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 KLHL26Q53HC5 615 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 RABL3Q5HYI8 236 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 TIGD3Q6B0B8 471 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 FRRS1Q6ZNA5 592 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 SLC15A3Q8IY34 581 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 PEX5LQ8IYB4 626 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 ANKFN1Q8N957 763 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 BHLHE22Q8NFJ8 381 aaPredicted RBP11.15□□□□□ -0.62
DDX55-210ENST00000543016 OR4C3Q8NH37 302 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 OR10A6Q8NH74 314 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 TMEM19Q96HH6 336 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 ZNF597Q96LX8 424 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 ZNF607Q96SK3 696 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 TREX2Q9BQ50 279 aaPredicted RBP11.15□□□□□ -0.62
DDX55-210ENST00000543016 SLC39A3Q9BRY0 314 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 SLC38A1Q9H2H9 487 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 ARMC7Q9H6L4 198 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 ZFP64Q9NPA5 681 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.15□□□□□ -0.62
DDX55-210ENST00000543016 ABCD2Q9UBJ2 740 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 ZNF232Q9UNY5 417 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 SLC35A3Q9Y2D2 325 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 IFT52Q9Y366 437 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 WIF1Q9Y5W5 379 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.15□□□□□ -0.62
DDX55-210ENST00000543016 ATRXP46100 2492 aa11.15□□□□□ -0.62
DDX55-210ENST00000543016 DSPPQ9NZW4 1301 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 TNRC6AQ8NDV7 1962 aaKnown RBP11.14□□□□□ -0.63
DDX55-210ENST00000543016 KMT2BQ9UMN6 2715 aaPredicted RBP11.14□□□□□ -0.63
DDX55-210ENST00000543016 AGAP5A6NIR3 686 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 FAM220BPB1ANY3 271 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 SERPINB7O75635 380 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 UGT2B17O75795 530 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 CBR3O75828 277 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 PGM3O95394 542 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 BCHEP06276 602 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 THBS1P07996 1170 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 CHRM4P08173 479 aa11.14□□□□□ -0.63
DDX55-210ENST00000543016 NUDT7P0C024 238 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms