RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 G2E3Q7L622 706 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 HPS6Q86YV9 775 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 ERI1Q8IV48 349 aaKnown RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 BBS7Q8IWZ6 715 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 SYCE1Q8N0S2 351 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 ZNF444Q8N0Y2 327 aaPredicted RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 THEM5Q8N1Q8 247 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 TMEM99Q8N816 258 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 LEMD2Q8NC56 503 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 GPRC5AQ8NFJ5 357 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 OR52N1Q8NH53 320 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 OR2T6Q8NHC8 308 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 GIPC3Q8TF64 312 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 U2AF1L4Q8WU68 220 aaKnown RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 SLC5A11Q8WWX8 675 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 PYDC1Q8WXC3 89 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 FAM46BQ96A09 425 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 TMIGD2Q96BF3 282 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 WBP1Q96G27 269 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 PRMT1Q99873 361 aaKnown RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 ZNF577Q9BSK1 485 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 TEKT3Q9BXF9 490 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 TDRD1Q9BXT4 1180 aaKnown RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 WWTR1Q9GZV5 400 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 SLC22A4Q9H015 551 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 RAB17Q9H0T7 212 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 DHX33Q9H6R0 707 aaKnown RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 DCLRE1BQ9H816 532 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 RPF1Q9H9Y2 349 aaKnown RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 S100A14Q9HCY8 104 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 ZC4H2Q9NQZ6 224 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 C19orf12Q9NSK7 152 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 PIGVQ9NUD9 493 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 PANK4Q9NVE7 773 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 HYPKQ9NX55 129 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 KLHL8Q9P2G9 620 aaPredicted RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 STX18Q9P2W9 335 aaKnown RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 CACNG5Q9UF02 275 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 EPHA6Q9UF33 1036 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 CDH9Q9ULB4 789 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 PACSIN2Q9UNF0 486 aaPredicted RBP2.83□□□□□ -1.96
USP28-210ENST00000542033 SNX6Q9UNH7 406 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 NRCAMQ92823 1304 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 ADCY9O60503 1353 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 WDR81Q562E7 1941 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 JCADQ9P266 1359 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 DISP3Q9P2K9 1392 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 PIK3C2GO75747 1445 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 CASKIN1Q8WXD9 1431 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 GRIN2AQ12879 1464 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 SNAPC4Q5SXM2 1469 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 ARHGEF12Q9NZN5 1544 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 CFAP74Q9C0B2 1584 aa2.83□□□□□ -1.96
USP28-210ENST00000542033 ITSN2Q9NZM3 1697 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 GSTTP1A0A1W2PQM5 241 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 VPS37CA5D8V6 355 aaPredicted RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 ZSCAN5CA6NGD5 496 aaPredicted RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 SLC15A5A6NIM6 579 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 A8MX80 341 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 FAM25AB3EWG3 89 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 FAM25CB3EWG5 89 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 FAM25GB3EWG6 89 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 ERVV-1B6SEH8 477 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 F8W036 122 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 H0YJX3 145 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 KPNA4O00629 521 aaPredicted RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 TXNDC9O14530 226 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 FPGTO14772 594 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 CLDN3O15551 220 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 ARHGEF9O43307 516 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 GPRIN2O60269 458 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 PFKFB2O60825 505 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 CCDC22O60826 627 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 PEX11AO75192 247 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 GLRA3O75311 464 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 ZNF821O75541 412 aaPredicted RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 IFNB1P01574 187 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 YES1P07947 543 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 LYNP07948 512 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 SFTPBP07988 381 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 SERPINF2P08697 491 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 KRT16P08779 473 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 TFPTP0C1Z6 253 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 TPBGLP0DKB5 382 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 RALAP11233 206 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 ICAM2P13598 275 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 CD59P13987 128 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 DARSP14868 501 aaKnown RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 CXCR2P25025 360 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 PTBP1P26599 531 aaKnown RBP eCLIP2.82□□□□□ -1.96
USP28-210ENST00000542033 NUP62P37198 522 aaPredicted RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 SLC1A4P43007 532 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 RPL5P46777 297 aaKnown RBP2.82□□□□□ -1.96
USP28-210ENST00000542033 SLC6A12P48065 614 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 SLC7A2P52569 658 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 CDH4P55283 916 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 CLDN17P56750 224 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 GPX6P59796 221 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 ACTR1AP61163 376 aa2.82□□□□□ -1.96
USP28-210ENST00000542033 FKBP1BP68106 108 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms