RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 PGM3O95394 542 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 NSA2O95478 260 aaKnown RBP7.76□□□□□ -1.17
CHD4-208ENST00000540960 H6PDO95479 791 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 OXSR1O95747 527 aaPredicted RBP7.76□□□□□ -1.17
CHD4-208ENST00000540960 ATP1B1P05026 303 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 ALPLP05186 524 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 CPMP14384 443 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 TYRP1P17643 537 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 RPL5P46777 297 aaKnown RBP7.76□□□□□ -1.17
CHD4-208ENST00000540960 MVDP53602 400 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 NR1H2P55055 460 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 VSX2P58304 361 aaPredicted RBP7.76□□□□□ -1.17
CHD4-208ENST00000540960 YBX1P67809 324 aaKnown RBP7.76□□□□□ -1.17
CHD4-208ENST00000540960 ADORA2A-AS1P86434 159 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 EEF1A2Q05639 463 aaKnown RBP7.76□□□□□ -1.17
CHD4-208ENST00000540960 LARS2Q15031 903 aaKnown RBP7.76□□□□□ -1.17
CHD4-208ENST00000540960 MPEG1Q2M385 716 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 PRTGQ2VWP7 1150 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 SLC36A3Q495N2 470 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 EIPR1Q53HC9 387 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 OTUD3Q5T2D3 398 aaPredicted RBP7.76□□□□□ -1.17
CHD4-208ENST00000540960 TTC33Q6PID6 262 aaPredicted RBP7.76□□□□□ -1.17
CHD4-208ENST00000540960 UGT2A3Q6UWM9 527 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 MED25Q71SY5 747 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 ZNF551Q7Z340 670 aaPredicted RBP7.76□□□□□ -1.17
CHD4-208ENST00000540960 C16orf62Q7Z3J2 963 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 SZRD1Q7Z422 152 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 PRSS42Q7Z5A4 293 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 TRIM73Q86UV7 250 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 CARM1Q86X55 608 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 GPR135Q8IZ08 494 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 C8orf59Q8N0T1 100 aaPredicted RBP7.76□□□□□ -1.17
CHD4-208ENST00000540960 CDRT4Q8N9R6 151 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 ACBD4Q8NC06 268 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 KCT2Q8NC54 265 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 WFDC11Q8NEX6 87 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 SLC38A5Q8WUX1 472 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 FAR1Q8WVX9 515 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 XAGE5Q8WWM1 108 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 CYGBQ8WWM9 190 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 NINJ1Q92982 152 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 OTUB1Q96FW1 271 aaPredicted RBP7.76□□□□□ -1.17
CHD4-208ENST00000540960 RMND5BQ96G75 393 aaPredicted RBP7.76□□□□□ -1.17
CHD4-208ENST00000540960 RBM18Q96H35 190 aaKnown RBP7.76□□□□□ -1.17
CHD4-208ENST00000540960 ZNF354BQ96LW1 612 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 CNBD2Q96M20 576 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 ZNF681Q96N22 645 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 ZNF285Q96NJ3 590 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 ZNF300Q96RE9 604 aaPredicted RBP7.76□□□□□ -1.17
CHD4-208ENST00000540960 STACQ99469 402 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 ENKD1Q9H0I2 346 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 MTHFD2LQ9H903 347 aaPredicted RBP7.76□□□□□ -1.17
CHD4-208ENST00000540960 KRCC1Q9NPI7 259 aaPredicted RBP7.76□□□□□ -1.17
CHD4-208ENST00000540960 SIRT3Q9NTG7 399 aaPredicted RBP7.76□□□□□ -1.17
CHD4-208ENST00000540960 SOHLH2Q9NX45 425 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 KCMF1Q9P0J7 381 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 SEMA5BQ9P283 1151 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 SEC14L3Q9UDX4 400 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 CFL2Q9Y281 166 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 ENPP4Q9Y6X5 453 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 V9GYQ6 96 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 MEGF8Q7Z7M0 2845 aa7.76□□□□□ -1.17
CHD4-208ENST00000540960 FITM1A5D6W6 292 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 SLC9B1P1A6NJY1 282 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 TNFRSF11BO00300 401 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 SOCS2O14508 198 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 SLC16A6O15403 523 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 ZNF749O43361 778 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 OR10H2O60403 315 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 MPZL2O60487 215 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 JRKO75564 520 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 CLPTM1O96005 669 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 SEMG1P04279 462 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 HBQ1P09105 142 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 ALOX5P09917 674 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 ITGAMP11215 1152 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 IGFBP5P24593 272 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 SOX11P35716 441 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 HMGA2P52926 109 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 PSMD4P55036 377 aaKnown RBP7.75□□□□□ -1.17
CHD4-208ENST00000540960 HSD17B7P56937 341 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 KCNJ10P78508 379 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 PPP2R2BQ00005 443 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 ACY1Q03154 408 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 STX4Q12846 297 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 KEAP1Q14145 624 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 RBM48Q5RL73 367 aaKnown RBP7.75□□□□□ -1.17
CHD4-208ENST00000540960 C6orf52Q5T4I8 152 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 CDC73Q6P1J9 531 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 MEX3BQ6ZN04 569 aaKnown RBP7.75□□□□□ -1.17
CHD4-208ENST00000540960 Q6ZS92 163 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 THAP5Q7Z6K1 395 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 CHERPQ8IWX8 916 aaKnown RBP7.75□□□□□ -1.17
CHD4-208ENST00000540960 PEX5LQ8IYB4 626 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 CCDC116Q8IYX3 515 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 TAGAPQ8N103 731 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 DEPDC4Q8N2C3 294 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 OR2L13Q8N349 312 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 ATG16L2Q8NAA4 619 aa7.75□□□□□ -1.17
CHD4-208ENST00000540960 NUP43Q8NFH3 380 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms