RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 TRIML2Q8N7C3 387 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 GATSQ8NAP1 163 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 OR9I1Q8NGQ6 314 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 DUSP19Q8WTR2 217 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 ITLN2Q8WWU7 325 aaPredicted RBP8.4□□□□□ -1.06
SNHG1-215ENST00000540904 SLC35G5Q96KT7 338 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 TIMP4Q99727 224 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 SLC35A5Q9BS91 424 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 DSN1Q9H410 356 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 SERHL2Q9H4I8 314 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 NPHS2Q9NP85 383 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 UBQLN4Q9NRR5 601 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 GIN1Q9NXP7 522 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 TAS2R10Q9NYW0 307 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 ZIM2Q9NZV7 527 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 MED11Q9P086 117 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 PLEKHB1Q9UF11 243 aaPredicted RBP8.4□□□□□ -1.06
SNHG1-215ENST00000540904 BTNL2Q9UIR0 455 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 DCTN4Q9UJW0 460 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 DKKL1Q9UK85 242 aa8.4□□□□□ -1.06
SNHG1-215ENST00000540904 RPH3AQ9Y2J0 694 aaPredicted RBP8.4□□□□□ -1.06
SNHG1-215ENST00000540904 ZGRF1Q86YA3 2104 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 NPIPA5A0A0B4J1W7 369 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 CCDC154A6NI56 674 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 DUXAA6NLW8 204 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 NPIPA7E9PJI5 369 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 SCDO00767 359 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 RFXANKO14593 260 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 NDUFB5O43674 189 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 EDF1O60869 148 aaKnown RBP8.39□□□□□ -1.07
SNHG1-215ENST00000540904 ANGPTL1O95841 491 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 GSNP06396 782 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 NPIPA8P0DM63 369 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 BMP7P18075 431 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 TBXA2RP21731 343 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 ACVR2AP27037 513 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 DPP4P27487 766 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 LCN1P31025 176 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 SRD5A2P31213 254 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 GCKP35557 465 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 POLR2JP52435 117 aaKnown RBP8.39□□□□□ -1.07
SNHG1-215ENST00000540904 SMSP52788 366 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 CRYZQ08257 329 aaKnown RBP8.39□□□□□ -1.07
SNHG1-215ENST00000540904 C17orf67Q0P5P2 114 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 LRRC74AQ0VAA2 488 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 PMPCAQ10713 525 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 FLYWCH1Q4VC44 716 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 TIGD2Q4W5G0 525 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 ATAD3BQ5T9A4 648 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 SAXO2Q658L1 398 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 TMEM211Q6ICI0 200 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 DNAJC14Q6Y2X3 702 aaPredicted RBP8.39□□□□□ -1.07
SNHG1-215ENST00000540904 C16orf62Q7Z3J2 963 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 MRGPRGQ86SM5 289 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 MARVELD2Q8N4S9 558 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 FADS6Q8N9I5 356 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 OR2M3Q8NG83 312 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 GOT1L1Q8NHS2 421 aaPredicted RBP8.39□□□□□ -1.07
SNHG1-215ENST00000540904 RFWD2Q8NHY2 731 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 XAGE5Q8WWM1 108 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 ABTB1Q969K4 478 aaPredicted RBP8.39□□□□□ -1.07
SNHG1-215ENST00000540904 VPS33AQ96AX1 596 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 NEURL3Q96EH8 262 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 DTNBP1Q96EV8 351 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 DMRTA2Q96SC8 542 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 CCDC28BQ9BUN5 200 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 OR2B2Q9GZK3 357 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 OR51I1Q9H343 314 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 PTGES2Q9H7Z7 377 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 MED4Q9NPJ6 270 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 FLNCQ14315 2725 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 EML6Q6ZMW3 1958 aa8.39□□□□□ -1.07
SNHG1-215ENST00000540904 COL12A1Q99715 3063 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 A0A0G2JND7 137 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 FAM234BA2RU67 622 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 ALG1L2C9J202 215 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 ZIC3O60481 467 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 WDR1O75083 606 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 ANP32DO95626 131 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 C1QCP02747 245 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 NGFRP08138 427 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 OR12D1P0DN82 309 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 GP1BBP13224 206 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 GABRA1P14867 456 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 NCF2P19878 526 aaPredicted RBP8.38□□□□□ -1.07
SNHG1-215ENST00000540904 DCTP40126 519 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 ZFP36L2P47974 494 aaKnown RBP8.38□□□□□ -1.07
SNHG1-215ENST00000540904 KHKP50053 298 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 RNF144AP50876 292 aaPredicted RBP8.38□□□□□ -1.07
SNHG1-215ENST00000540904 DSCR4P56555 118 aaPredicted RBP8.38□□□□□ -1.07
SNHG1-215ENST00000540904 NHSL2Q5HYW2 709 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 C6orf10Q5SRN2 563 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 DCST1Q5T197 706 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 RAET1LQ5VY80 246 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 DMRTA1Q5VZB9 504 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 HIST2H2BCQ6DN03 193 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 VASNQ6EMK4 673 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 XKRXQ6PP77 449 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 B3GNT6Q6ZMB0 384 aa8.38□□□□□ -1.07
SNHG1-215ENST00000540904 OLIG3Q7RTU3 272 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms