RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 TMEM150CB9EJG8 249 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 IFNA14P01570 189 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 KRT8P05787 483 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 RGS6P49758 472 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 LIMK1P53667 647 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 KRR1Q13601 381 aaKnown RBP15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 IFI44LQ53G44 452 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 ZNF628Q5EBL2 1059 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 PRAMEF17Q5VTA0 474 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 CCBE1Q6UXH8 406 aaPredicted RBP15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 GDPD3Q7L5L3 318 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 TMPRSS9Q7Z410 1059 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 OR10G2Q8NGC3 310 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 TP53INP1Q96A56 240 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 CHCHD6Q9BRQ6 235 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 ZNF226Q9NYT6 803 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 NDUFAF4Q9P032 175 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 PCDHGB6Q9Y5F9 930 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 CCDC88CQ9P219 2028 aa15.92■□□□□ 0.14
PCDHB17P-201ENST00000539533 H3BMH7 237 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 ADAMDEC1O15204 470 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 MFN2O95140 757 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 NSA2O95478 260 aaKnown RBP15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 FOLR1P15328 257 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 HOXD11P31277 338 aaPredicted RBP15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 MAN2A2P49641 1150 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 UGT2B15P54855 530 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 TRIM61Q5EBN2 209 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 SLX4IPQ5VYV7 408 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 WDR74Q6RFH5 385 aaPredicted RBP15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 HMGN2P46Q86SG4 172 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 ZNF605Q86T29 641 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 EID2Q8N6I1 236 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 CHAC2Q8WUX2 184 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 RLIMQ9NVW2 624 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 NTMQ9P121 344 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 FITM1A5D6W6 292 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 FAM172BPA6NC97 362 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 OR2B3O76000 313 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 ATP1B1P05026 303 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 CHRM4P08173 479 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 RNH1P13489 461 aaKnown RBP15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 NT5EP21589 574 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 CRISP3P54108 245 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 ST3GAL4Q11206 333 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 GRM7Q14831 915 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 NR0B2Q15466 257 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 GARNL3Q5VVW2 1013 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 DGAT2L6Q6ZPD8 337 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 OR2L13Q8N349 312 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 D2HGDHQ8N465 521 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 MAU2Q9Y6X3 613 aa15.91■□□□□ 0.14
PCDHB17P-201ENST00000539533 CENPBD1B2RD01 187 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 TGFBR3LH3BV60 316 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 RECKO95980 971 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 CT62P0C5K7 136 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 GABRB1P18505 474 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 SKP1P63208 163 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 FAM209AQ5JX71 171 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 ZNF574Q6ZN55 896 aaPredicted RBP15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 SLC16A11Q8NCK7 471 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 OR1L3Q8NH93 324 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 SLC41A2Q96JW4 573 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 ACTRT3Q9BYD9 372 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 OR2B2Q9GZK3 357 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 SMOC1Q9H4F8 434 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 SEMA5BQ9P283 1151 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 POFUT2Q9Y2G5 429 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 AGRPO00253 132 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 SNX4O95219 450 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 HSMCR30P0CW71 290 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 PPP2R1BP30154 601 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 DEFA1P59665 94 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 DEFA3P59666 94 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 TEKQ02763 1124 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 IRF3Q14653 427 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 PUM1Q14671 1186 aaKnown RBP eCLIP15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 PRICKLE4Q2TBC4 344 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 GPAT3Q53EU6 434 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 MFSD12Q6NUT3 480 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 TTLL10Q6ZVT0 673 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 LGI4Q8N135 537 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 CARFQ8N187 725 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 DEPDC4Q8N2C3 294 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 OR7G1Q8NGA0 311 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 GPR32P1Q8NGA4 272 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 OR4C15Q8NGM1 316 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 OR52J3Q8NH60 311 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 SLC35A4Q96G79 324 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 CRELD1Q96HD1 420 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 MS4A4EQ96PG1 132 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 NIPSNAP1Q9BPW8 284 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 GMEB2Q9UKD1 530 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 MKLN1Q9UL63 735 aa15.9■□□□□ 0.14
PCDHB17P-201ENST00000539533 J3KTA2 159 aa15.89■□□□□ 0.13
PCDHB17P-201ENST00000539533 ANXA8P13928 327 aa15.89■□□□□ 0.13
PCDHB17P-201ENST00000539533 ALAS2P22557 587 aa15.89■□□□□ 0.13
PCDHB17P-201ENST00000539533 ETV6P41212 452 aa15.89■□□□□ 0.13
PCDHB17P-201ENST00000539533 AVPR1BP47901 424 aa15.89■□□□□ 0.13
PCDHB17P-201ENST00000539533 ANXA11P50995 505 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms