RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 FAM74A7A6NL05 159 aa4.96□□□□□ -1.62
TRAV11-201ENST00000539512 E9PLD3 99 aa4.96□□□□□ -1.62
TRAV11-201ENST00000539512 HAT1O14929 419 aa4.96□□□□□ -1.62
TRAV11-201ENST00000539512 DIRAS3O95661 229 aa4.96□□□□□ -1.62
TRAV11-201ENST00000539512 ATP5A1P25705 553 aaKnown RBP4.96□□□□□ -1.62
TRAV11-201ENST00000539512 CDH5P33151 784 aaPredicted RBP4.96□□□□□ -1.62
TRAV11-201ENST00000539512 CD86P42081 329 aa4.96□□□□□ -1.62
TRAV11-201ENST00000539512 NOVA1P51513 510 aaKnown RBP4.96□□□□□ -1.62
TRAV11-201ENST00000539512 FAM74A3Q4VXF1 159 aa4.96□□□□□ -1.62
TRAV11-201ENST00000539512 TMEM41BQ5BJD5 291 aa4.96□□□□□ -1.62
TRAV11-201ENST00000539512 UTF1Q5T230 341 aa4.96□□□□□ -1.62
TRAV11-201ENST00000539512 CGB2Q6NT52 195 aa4.96□□□□□ -1.62
TRAV11-201ENST00000539512 PAMR1Q6UXH9 720 aa4.96□□□□□ -1.62
TRAV11-201ENST00000539512 CSNK1A1LQ8N752 337 aa4.96□□□□□ -1.62
TRAV11-201ENST00000539512 OR5AU1Q8NGC0 362 aa4.96□□□□□ -1.62
TRAV11-201ENST00000539512 SLC30A2Q9BRI3 323 aa4.96□□□□□ -1.62
TRAV11-201ENST00000539512 GPN2Q9H9Y4 310 aaPredicted RBP4.96□□□□□ -1.62
TRAV11-201ENST00000539512 PNO1Q9NRX1 252 aaKnown RBP4.96□□□□□ -1.62
TRAV11-201ENST00000539512 CUX2O14529 1486 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 FAM168BA1KXE4 195 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 MAPK13O15264 365 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 CHADO15335 359 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 TSC22D2O75157 780 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 OR4F21O95013 312 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 MFN2O95140 757 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 DESP17661 470 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 IGHV1-2P23083 117 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 IL2RGP31785 369 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 RPL32P62910 135 aaKnown RBP4.95□□□□□ -1.62
TRAV11-201ENST00000539512 RGS1Q08116 209 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 METTL11BQ5VVY1 283 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 ZNF57Q68EA5 555 aaPredicted RBP4.95□□□□□ -1.62
TRAV11-201ENST00000539512 LHFPL4Q7Z7J7 247 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 APOBEC3FQ8IUX4 373 aaKnown RBP4.95□□□□□ -1.62
TRAV11-201ENST00000539512 ZNF584Q8IVC4 421 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 FAF2Q96CS3 445 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 TMEM80Q96HE8 168 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 GPA33Q99795 319 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 THUMPD2Q9BTF0 503 aaKnown RBP4.95□□□□□ -1.62
TRAV11-201ENST00000539512 CCSER1Q9C0I3 900 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 POLR3FQ9H1D9 316 aaPredicted RBP4.95□□□□□ -1.62
TRAV11-201ENST00000539512 DHX33Q9H6R0 707 aaKnown RBP4.95□□□□□ -1.62
TRAV11-201ENST00000539512 UTP6Q9NYH9 597 aaKnown RBP4.95□□□□□ -1.62
TRAV11-201ENST00000539512 CYTH4Q9UIA0 394 aa4.95□□□□□ -1.62
TRAV11-201ENST00000539512 TDRD15B5MCY1 1934 aaKnown RBP4.95□□□□□ -1.62
TRAV11-201ENST00000539512 A0A1W2PQ72 361 aa4.94□□□□□ -1.62
TRAV11-201ENST00000539512 C19orf81C9J6K1 198 aa4.94□□□□□ -1.62
TRAV11-201ENST00000539512 DUX1O43812 170 aa4.94□□□□□ -1.62
TRAV11-201ENST00000539512 NOL3O60936 208 aaKnown RBP4.94□□□□□ -1.62
TRAV11-201ENST00000539512 IFNB1P01574 187 aa4.94□□□□□ -1.62
TRAV11-201ENST00000539512 DLSTP36957 453 aa4.94□□□□□ -1.62
TRAV11-201ENST00000539512 MEOX2P50222 304 aa4.94□□□□□ -1.62
TRAV11-201ENST00000539512 RND3P61587 244 aa4.94□□□□□ -1.62
TRAV11-201ENST00000539512 KCNJ11Q14654 390 aa4.94□□□□□ -1.62
TRAV11-201ENST00000539512 LANCL3Q6ZV70 420 aa4.94□□□□□ -1.62
TRAV11-201ENST00000539512 TMEM17Q86X19 198 aa4.94□□□□□ -1.62
TRAV11-201ENST00000539512 TRUB1Q8WWH5 349 aaKnown RBP4.94□□□□□ -1.62
TRAV11-201ENST00000539512 MAPKAP1Q9BPZ7 522 aa4.94□□□□□ -1.62
TRAV11-201ENST00000539512 FARSBQ9NSD9 589 aaKnown RBP4.94□□□□□ -1.62
TRAV11-201ENST00000539512 AGPAT5Q9NUQ2 364 aa4.94□□□□□ -1.62
TRAV11-201ENST00000539512 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.94□□□□□ -1.62
TRAV11-201ENST00000539512 MRPL39Q9NYK5 338 aaKnown RBP4.94□□□□□ -1.62
TRAV11-201ENST00000539512 KLHL21Q9UJP4 597 aa4.94□□□□□ -1.62
TRAV11-201ENST00000539512 CLEC4EQ9ULY5 219 aa4.94□□□□□ -1.62
TRAV11-201ENST00000539512 MFHAS1Q9Y4C4 1052 aa4.94□□□□□ -1.62
TRAV11-201ENST00000539512 CARMIL1Q5VZK9 1371 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 PARD3Q8TEW0 1356 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 TMEM110-MUSTN1A8MSY1 372 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 CLDN5O00501 218 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 CD55P08174 381 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 FASP25445 335 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 UGT1A3P35503 534 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 IGLV3-21P80748 117 aaPredicted RBP4.93□□□□□ -1.62
TRAV11-201ENST00000539512 KIAA0040Q15053 153 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 MAPK6Q16659 721 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 CCDC57Q2TAC2 916 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 TMEM110Q86TL2 294 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 ZNF573Q86YE8 665 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 C9orf40Q8IXQ3 194 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 SPEM1Q8N4L4 309 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 ADAMTS16Q8TE57 1224 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 CNOT6LQ96LI5 555 aaKnown RBP4.93□□□□□ -1.62
TRAV11-201ENST00000539512 KIR2DL4Q99706 377 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 DPH7Q9BTV6 452 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 CRNKL1Q9BZJ0 848 aaKnown RBP4.93□□□□□ -1.62
TRAV11-201ENST00000539512 AP1M2Q9Y6Q5 423 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 SPACA6W5XKT8 324 aa4.93□□□□□ -1.62
TRAV11-201ENST00000539512 A0A1B0GUL7 405 aa4.92□□□□□ -1.62
TRAV11-201ENST00000539512 GSAPA4D1B5 854 aa4.92□□□□□ -1.62
TRAV11-201ENST00000539512 SAGE2PA6NJ88 616 aa4.92□□□□□ -1.62
TRAV11-201ENST00000539512 ZSCAN5BA6NJL1 495 aa4.92□□□□□ -1.62
TRAV11-201ENST00000539512 NUDT21O43809 227 aaKnown RBP4.92□□□□□ -1.62
TRAV11-201ENST00000539512 LANCL1O43813 399 aa4.92□□□□□ -1.62
TRAV11-201ENST00000539512 IDH1O75874 414 aaKnown RBP4.92□□□□□ -1.62
TRAV11-201ENST00000539512 KRT6BP04259 564 aa4.92□□□□□ -1.62
TRAV11-201ENST00000539512 HBQ1P09105 142 aa4.92□□□□□ -1.62
TRAV11-201ENST00000539512 CCDC166P0CW27 439 aa4.92□□□□□ -1.62
TRAV11-201ENST00000539512 MAGEA5P43359 124 aa4.92□□□□□ -1.62
TRAV11-201ENST00000539512 KRT6CP48668 564 aa4.92□□□□□ -1.62
TRAV11-201ENST00000539512 RIPPLY2Q5TAB7 128 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms