RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 CSNK1G3Q9Y6M4 447 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 PABPC4LP0CB38 370 aaKnown RBP10.56□□□□□ -0.72
LINC00346-201ENST00000538077 ZNF182P17025 639 aaPredicted RBP10.56□□□□□ -0.72
LINC00346-201ENST00000538077 STT3AP46977 705 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 TM4SF4P48230 202 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 CLDN8P56748 225 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 CSNK2A1P68400 391 aaPredicted RBP10.56□□□□□ -0.72
LINC00346-201ENST00000538077 MAB21L1Q13394 359 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 CST9Q5W186 159 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 ZC3H3Q8IXZ2 948 aaKnown RBP10.56□□□□□ -0.72
LINC00346-201ENST00000538077 TEX19Q8NA77 164 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 CSNK2A3Q8NEV1 391 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 ZNF317Q96PQ6 595 aaPredicted RBP10.56□□□□□ -0.72
LINC00346-201ENST00000538077 TP63Q9H3D4 680 aaPredicted RBP10.56□□□□□ -0.72
LINC00346-201ENST00000538077 GAREM1Q9H706 876 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 NMNAT1Q9HAN9 279 aaPredicted RBP10.56□□□□□ -0.72
LINC00346-201ENST00000538077 PCDHGA8Q9Y5G5 932 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 ONECUT3O60422 494 aaPredicted RBP10.56□□□□□ -0.72
LINC00346-201ENST00000538077 PRLP01236 227 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 ENDOUP21128 410 aaKnown RBP10.56□□□□□ -0.72
LINC00346-201ENST00000538077 PTGS2P35354 604 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 HNRNPA1L2Q32P51 320 aaKnown RBP10.56□□□□□ -0.72
LINC00346-201ENST00000538077 BLOC1S3Q6QNY0 202 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 OR5H2Q8NGV7 314 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 TOMM40LQ969M1 308 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 HOXD1Q9GZZ0 328 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 PLEKHA3Q9HB20 300 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 IGKV6-21A0A0C4DH24 114 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 DCDC2BA2VCK2 349 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 TRAPPC13A5PLN9 417 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 SLC1A7O00341 560 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 SLITRK5O94991 958 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 GGT1P19440 569 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 HTR1EP28566 365 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 GJA4P35212 333 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 PBX2P40425 430 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 ISCA2Q86U28 154 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 Q8N402 240 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 ACOT4Q8N9L9 421 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 IL1F10Q8WWZ1 152 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 ISOC1Q96CN7 298 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 SDSLQ96GA7 329 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 MGAT4CQ9UBM8 478 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 SEC14L4Q9UDX3 406 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 SLC22A31A6NKX4 558 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 RP2O75695 350 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 MOB3CQ70IA8 216 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 ARL14Q8N4G2 192 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 ENKD1Q9H0I2 346 aa10.56□□□□□ -0.72
LINC00346-201ENST00000538077 AK1P00568 194 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 VASPP50552 380 aaPredicted RBP10.55□□□□□ -0.72
LINC00346-201ENST00000538077 TUBA1BP68363 451 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 TUBA4AP68366 448 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 TUBA1AQ71U36 451 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 RABEPKQ7Z6M1 372 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 KIF18BQ86Y91 864 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 ZNF808Q8N4W9 903 aaPredicted RBP10.55□□□□□ -0.72
LINC00346-201ENST00000538077 OR51Q1Q8NH59 317 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 PHOSPHO2Q8TCD6 241 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 BMFQ96LC9 184 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 CUTCQ9NTM9 273 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 STUB1Q9UNE7 303 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 ABCA3Q99758 1704 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 AQP9O43315 295 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 DAP3P51398 398 aaKnown RBP10.55□□□□□ -0.72
LINC00346-201ENST00000538077 SUOXP51687 545 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 SIRPAP78324 504 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 RHEBQ15382 184 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 TRAM1Q15629 374 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 CTSL3PQ5NE16 218 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 LCTLQ6UWM7 567 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 HTR3DQ70Z44 454 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 OR2T4Q8NH00 348 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 HSD17B8Q92506 261 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 GPN2Q9H9Y4 310 aaPredicted RBP10.55□□□□□ -0.72
LINC00346-201ENST00000538077 LSM5Q9Y4Y9 91 aaKnown RBP10.55□□□□□ -0.72
LINC00346-201ENST00000538077 MYH6P13533 1939 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 DNAJC25-GNG10A0A024R161 153 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 TVP23AA6NH52 213 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 H0YJX3 145 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 MT-ND2P03891 347 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 UCHL1P09936 223 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 CNR2P34972 360 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 ZNF81P51508 661 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 P2RY14Q15391 338 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 NADSYN1Q6IA69 706 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 ZNF845Q96IR2 970 aaPredicted RBP10.55□□□□□ -0.72
LINC00346-201ENST00000538077 SLC6A18Q96N87 628 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 SYT4Q9H2B2 425 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 ANKRD36CQ5JPF3 1778 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 SIGLEC6O43699 453 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 LILRB3O75022 631 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 H2AFB2P0C5Z0 115 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 PRDX3P30048 256 aaKnown RBP10.55□□□□□ -0.72
LINC00346-201ENST00000538077 PIGGQ5H8A4 983 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 PM20D1Q6GTS8 502 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 FEVQ99581 238 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 POT1Q9NUX5 634 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 PLEK2Q9NYT0 353 aa10.55□□□□□ -0.72
LINC00346-201ENST00000538077 A0A0U1RQK1 487 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms