RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 GBP6Q6ZN66 633 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 NCCRP1Q6ZVX7 275 aaPredicted RBP4.76□□□□□ -1.65
CLIP1-207ENST00000536634 BCORP1Q8N888 145 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 ACBD4Q8NC06 268 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 CATSPER1Q8NEC5 780 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 FAM81BQ96LP2 452 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 FER1L6-AS2Q96M78 137 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 GBP5Q96PP8 586 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 GSDMAQ96QA5 445 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 TAAR6Q96RI8 345 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 TMEM121Q9BTD3 319 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 CARD9Q9H257 536 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 DENND2DQ9H6A0 471 aaPredicted RBP4.76□□□□□ -1.65
CLIP1-207ENST00000536634 ADPRHL2Q9NX46 363 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 P4HTMQ9NXG6 502 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 GAGE2DQ9UEU5 116 aa4.76□□□□□ -1.65
CLIP1-207ENST00000536634 SNRNP200O75643 2136 aaKnown RBP4.76□□□□□ -1.65
CLIP1-207ENST00000536634 GTF3C1Q12789 2109 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 A0A0J9YYE9 177 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 A0A1W2PQ67 120 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 TMEM150CB9EJG8 249 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 EEF2KO00418 725 aaKnown RBP4.75□□□□□ -1.65
CLIP1-207ENST00000536634 AP3D1O14617 1153 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 CHUKO15111 745 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 NDUFS4O43181 175 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 GPR137BO60478 399 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 DOK2O60496 412 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 RSL1D1O76021 490 aaKnown RBP4.75□□□□□ -1.65
CLIP1-207ENST00000536634 GNA14O95837 355 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 TRBC1P01850 177 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 ERCC2P18074 760 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 KLK2P20151 261 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 EPHA2P29317 976 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 SPINT3P49223 89 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 CSNK1G2P78368 415 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 OGDHQ02218 1023 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 C1orf189Q5VU69 101 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 MLIPQ5VWP3 458 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 ABRAXAS1Q6UWZ7 409 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 Q71RC1 249 aaPredicted RBP4.75□□□□□ -1.65
CLIP1-207ENST00000536634 NOTCH2NLQ7Z3S9 236 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 TGIF2LYQ8IUE0 185 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 CNPY4Q8N129 248 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 L3MBTL4Q8NA19 623 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 MSANTD4Q8NCY6 345 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 MOAP1Q96BY2 351 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 HDAC11Q96DB2 347 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 CXorf40BQ96DE9 158 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 PEBP4Q96S96 227 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 NRTNQ99748 197 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 SMR3AQ99954 134 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 ETNK2Q9NVF9 386 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 SOHLH2Q9NX45 425 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 NOCTQ9UK39 431 aaKnown RBP4.75□□□□□ -1.65
CLIP1-207ENST00000536634 FBXL4Q9UKA2 621 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 CHKBQ9Y259 395 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 BTRCQ9Y297 605 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 RPH3AQ9Y2J0 694 aaPredicted RBP4.75□□□□□ -1.65
CLIP1-207ENST00000536634 PADI2Q9Y2J8 665 aa4.75□□□□□ -1.65
CLIP1-207ENST00000536634 PTRH2Q9Y3E5 179 aaKnown RBP4.75□□□□□ -1.65
CLIP1-207ENST00000536634 SONP18583 2426 aaKnown RBP4.75□□□□□ -1.65
CLIP1-207ENST00000536634 HCFC1P51610 2035 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 C1orf232A0A0U1RR37 186 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 GTPBP10A4D1E9 387 aaKnown RBP4.74□□□□□ -1.65
CLIP1-207ENST00000536634 SLC9B1P1A6NJY1 282 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 C9J4A7 227 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 PLOD2O00469 737 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 ZNF749O43361 778 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 HCRTR1O43613 425 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 MITFO75030 526 aaPredicted RBP4.74□□□□□ -1.65
CLIP1-207ENST00000536634 SMC2O95347 1197 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 ACP2P11117 423 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 KRT3P12035 628 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 MMP9P14780 707 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 ZNF30P17039 623 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 ZNF7P17097 686 aaPredicted RBP4.74□□□□□ -1.65
CLIP1-207ENST00000536634 CYP2A7P20853 494 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 LMAN1P49257 510 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 IST1P53990 364 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 GSCP56915 257 aaPredicted RBP4.74□□□□□ -1.65
CLIP1-207ENST00000536634 AIMP2Q13155 320 aaKnown RBP4.74□□□□□ -1.65
CLIP1-207ENST00000536634 DPYSQ14117 519 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 CAMK4Q16566 473 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 C3AR1Q16581 482 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 LCE1FQ5T754 118 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 KLC3Q6P597 504 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 XKRXQ6PP77 449 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 TMEM207Q6UWW9 146 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 WASH2PQ6VEQ5 465 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 LINC00696Q6ZRV3 163 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 CYP4V2Q6ZWL3 525 aaPredicted RBP4.74□□□□□ -1.65
CLIP1-207ENST00000536634 GALNT5Q7Z7M9 940 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 CREBRFQ8IUR6 639 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 OR2T12Q8NG77 320 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 OR2Y1Q8NGV0 311 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 TMEM190Q8WZ59 177 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 SLC47A1Q96FL8 570 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 ZNF599Q96NL3 588 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 AGAP3Q96P47 875 aa4.74□□□□□ -1.65
CLIP1-207ENST00000536634 IP6K3Q96PC2 410 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms