RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 KCNK2O95069 426 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 DLGAP3O95886 979 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 HBQ1P09105 142 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 CRYBB2P43320 205 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 TMED10P49755 219 aaKnown RBP12.45□□□□□ -0.42
VPS33B-202ENST00000535906 EEF1A1P68104 462 aaKnown RBP12.45□□□□□ -0.42
VPS33B-202ENST00000535906 MGAT2Q10469 447 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 MLLT11Q13015 90 aaPredicted RBP12.45□□□□□ -0.42
VPS33B-202ENST00000535906 DUSP8Q13202 625 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 LARS2Q15031 903 aaKnown RBP12.45□□□□□ -0.42
VPS33B-202ENST00000535906 EXOSC6Q5RKV6 272 aaKnown RBP12.45□□□□□ -0.42
VPS33B-202ENST00000535906 PAQR6Q6TCH4 344 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 SYT13Q7L8C5 426 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 PARGQ86W56 976 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 TMEM255BQ8WV15 326 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 ZNF582Q96NG8 517 aaPredicted RBP12.45□□□□□ -0.42
VPS33B-202ENST00000535906 KCNS3Q9BQ31 491 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 POLR2J2Q9GZM3 115 aaKnown RBP12.45□□□□□ -0.42
VPS33B-202ENST00000535906 ZNF350Q9GZX5 532 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 ANKRD19PQ9H560 264 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 TRIM45Q9H8W5 580 aaPredicted RBP12.45□□□□□ -0.42
VPS33B-202ENST00000535906 EXOSC4Q9NPD3 245 aaKnown RBP12.45□□□□□ -0.42
VPS33B-202ENST00000535906 MAT2BQ9NZL9 334 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 KCNE5Q9UJ90 142 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 POMT2Q9UKY4 750 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 STUB1Q9UNE7 303 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 A0A087WV62 115 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 RDH16O75452 317 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 PTNP21246 168 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 IFNGR2P38484 337 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 RPS19P39019 145 aaKnown RBP12.45□□□□□ -0.42
VPS33B-202ENST00000535906 ZNF136P52737 540 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 C1DQ13901 141 aaKnown RBP12.45□□□□□ -0.42
VPS33B-202ENST00000535906 GAS6Q14393 721 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 CLEC12AQ5QGZ9 265 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 DCST2Q5T1A1 773 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 SLC27A4Q6P1M0 643 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 DEFB119Q8N690 84 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 OR9A4Q8NGU2 314 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 TEX47Q8TBZ9 253 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 ACOT11Q8WXI4 607 aaPredicted RBP12.45□□□□□ -0.42
VPS33B-202ENST00000535906 ANKRD9Q96BM1 317 aaPredicted RBP12.45□□□□□ -0.42
VPS33B-202ENST00000535906 SLC41A3Q96GZ6 507 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 TXNDC15Q96J42 360 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 SEMA6CQ9H3T2 930 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 SIAEQ9HAT2 523 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 DIMT1Q9UNQ2 313 aaKnown RBP12.45□□□□□ -0.42
VPS33B-202ENST00000535906 CLCA2Q9UQC9 943 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 GPR52Q9Y2T5 361 aa12.45□□□□□ -0.42
VPS33B-202ENST00000535906 CAB39Q9Y376 341 aaPredicted RBP12.45□□□□□ -0.42
VPS33B-202ENST00000535906 NPIPA5A0A0B4J1W7 369 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 NPIPA7E9PJI5 369 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 MYL12BO14950 172 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 NPIPA8P0DM63 369 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 PRG2P13727 222 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 IFNA8P32881 189 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 RNF144AP50876 292 aaPredicted RBP12.44□□□□□ -0.42
VPS33B-202ENST00000535906 MAZP56270 477 aaKnown RBP12.44□□□□□ -0.42
VPS33B-202ENST00000535906 DEFA1P59665 94 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 DEFA3P59666 94 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 SRSF5Q13243 272 aaKnown RBP12.44□□□□□ -0.42
VPS33B-202ENST00000535906 DECR1Q16698 335 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 DGAT2L6Q6ZPD8 337 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 RASSF6Q6ZTQ3 369 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 NRMQ8IXM6 262 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 ARHGEF39Q8N4T4 335 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 AVL9Q8NBF6 648 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 PIGXQ8TBF5 258 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 CEP19Q96LK0 163 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 SDHCQ99643 169 aaPredicted RBP12.44□□□□□ -0.42
VPS33B-202ENST00000535906 SLC30A2Q9BRI3 323 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 CCDC32Q9BV29 185 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 TTYH1Q9H313 450 aaPredicted RBP12.44□□□□□ -0.42
VPS33B-202ENST00000535906 SMURF1Q9HCE7 757 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 TESQ9UGI8 421 aaKnown RBP12.44□□□□□ -0.42
VPS33B-202ENST00000535906 KLHL3Q9UH77 587 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 SLC7A7Q9UM01 511 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 SPEGQ15772 3267 aa12.44□□□□□ -0.42
VPS33B-202ENST00000535906 HYKKA2RU49 373 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 ZNF670-ZNF695F2Z2N8 137 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 PEX12O00623 359 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 MBTPS2O43462 519 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 PIP5K1CO60331 668 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 STX11O75558 287 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 RAB36O95755 333 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 SPNP16150 400 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 GPR4P46093 362 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 BLKP51451 505 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 ARMC6Q6NXE6 501 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 FIGNL1Q6PIW4 674 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 MRGPREQ86SM8 312 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 ZNF619Q8N2I2 560 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 COX18Q8N8Q8 333 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 CDRT4Q8N9R6 151 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 OR52I1Q8NGK6 324 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 OR9Q1Q8NGQ5 310 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 TMEM163Q8TC26 289 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 GPR151Q8TDV0 419 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 CTHRC1Q96CG8 243 aa12.43□□□□□ -0.42
VPS33B-202ENST00000535906 MSANTD3Q96H12 275 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms