RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 ME2P23368 584 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 AGTR1P30556 359 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 KRT6CP48668 564 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 NCBP2P52298 156 aaKnown RBP eCLIP7.18□□□□□ -1.26
CHFR-211ENST00000535897 NUDT6P53370 316 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 PSMD4P55036 377 aaKnown RBP7.18□□□□□ -1.26
CHFR-211ENST00000535897 CDH13P55290 713 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 PSG6Q00889 435 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 ZNF844Q08AG5 666 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 C17orf67Q0P5P2 114 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 TSC22D1Q15714 1073 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.18□□□□□ -1.26
CHFR-211ENST00000535897 GLYR1Q49A26 553 aaPredicted RBP7.18□□□□□ -1.26
CHFR-211ENST00000535897 CYP27C1Q4G0S4 372 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 TMEM201Q5SNT2 666 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 FAM219BQ5XKK7 198 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 HBMQ6B0K9 141 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 ADAM5Q6NVV9 412 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 LETMD1Q6P1Q0 360 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 TMEM107Q6UX40 140 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 PLD6Q8N2A8 252 aaKnown RBP7.18□□□□□ -1.26
CHFR-211ENST00000535897 CDYL2Q8N8U2 506 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 KBTBD8Q8NFY9 601 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 LILRB1Q8NHL6 650 aaPredicted RBP7.18□□□□□ -1.26
CHFR-211ENST00000535897 NEUROG1Q92886 237 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 GPR78Q96P69 363 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 KCNK17Q96T54 332 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 NAPGQ99747 312 aaPredicted RBP7.18□□□□□ -1.26
CHFR-211ENST00000535897 RHNO1Q9BSD3 238 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 BEX2Q9BXY8 128 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 EBPLQ9BY08 206 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 RTN4RQ9BZR6 473 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 AMBRA1Q9C0C7 1298 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 OR10A4Q9H209 315 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 GLRX2Q9NS18 164 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 DDX18Q9NVP1 670 aaKnown RBP7.18□□□□□ -1.26
CHFR-211ENST00000535897 FAIMQ9NVQ4 179 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 PAQR5Q9NXK6 330 aaPredicted RBP7.18□□□□□ -1.26
CHFR-211ENST00000535897 GRHL1Q9NZI5 618 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 RNF14Q9UBS8 474 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 DMGDHQ9UI17 866 aaKnown RBP7.18□□□□□ -1.26
CHFR-211ENST00000535897 MCM8Q9UJA3 840 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 GDF2Q9UK05 429 aaPredicted RBP7.18□□□□□ -1.26
CHFR-211ENST00000535897 CDC42EP3Q9UKI2 254 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 NFU1Q9UMS0 254 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 UTP11Q9Y3A2 253 aaKnown RBP7.18□□□□□ -1.26
CHFR-211ENST00000535897 PRR14LQ5THK1 2151 aa7.18□□□□□ -1.26
CHFR-211ENST00000535897 PCNX3Q9H6A9 2034 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 HMX2A2RU54 273 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 MANBAO00462 879 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 RAD51CO43502 376 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 GPRIN2O60269 458 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 KCNH1O95259 989 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 UTS2O95399 124 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 NTN1O95631 604 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 IL33O95760 270 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 DANCRP0C864 163 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 PABPC4LP0CB38 370 aaKnown RBP7.17□□□□□ -1.26
CHFR-211ENST00000535897 ZNF17P17021 662 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 IL11P20809 199 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 HMOX2P30519 316 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 ZNF41P51814 821 aaPredicted RBP7.17□□□□□ -1.26
CHFR-211ENST00000535897 CAV1Q03135 178 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 BSPH1Q075Z2 132 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 ACSM2AQ08AH3 577 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 CSTF3Q12996 717 aaKnown RBP7.17□□□□□ -1.26
CHFR-211ENST00000535897 TAB1Q15750 504 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 ZNF672Q499Z4 452 aaPredicted RBP7.17□□□□□ -1.26
CHFR-211ENST00000535897 SPIN4Q56A73 249 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 TCHHL1Q5QJ38 904 aaPredicted RBP7.17□□□□□ -1.26
CHFR-211ENST00000535897 TEX35Q5T0J7 233 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 NCMAPQ5T1S8 102 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 PDSS1Q5T2R2 415 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 C6orf52Q5T4I8 152 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 ACSM2BQ68CK6 577 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 GTF2IRD2BQ6EKJ0 949 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 FIGNL1Q6PIW4 674 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 GALNT10Q86SR1 603 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 GTF2IRD2Q86UP8 949 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 BANPQ8N9N5 519 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 GATSQ8NAP1 163 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 OR2V1Q8NHB1 315 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 FBXO25Q8TCJ0 367 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 C16orf78Q8WTQ4 265 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 HSD17B8Q92506 261 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 KISS1RQ969F8 398 aaPredicted RBP7.17□□□□□ -1.26
CHFR-211ENST00000535897 HDHD5Q9BXW7 423 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 C3orf14Q9HBI5 128 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 LRTM1Q9HBL6 345 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 EQTNQ9NQ60 294 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 MIEF1Q9NQG6 463 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 FBXO34Q9NWN3 711 aa7.17□□□□□ -1.26
CHFR-211ENST00000535897 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.17□□□□□ -1.266e-7■■■□□ 15.2
CHFR-211ENST00000535897 IGHV4-30-2A0A087WSY4 118 aa7.16□□□□□ -1.26
CHFR-211ENST00000535897 A0A087WZY1 265 aa7.16□□□□□ -1.26
CHFR-211ENST00000535897 FAM234BA2RU67 622 aa7.16□□□□□ -1.26
CHFR-211ENST00000535897 ULK1O75385 1050 aa7.16□□□□□ -1.26
CHFR-211ENST00000535897 SUPT7LO94864 414 aa7.16□□□□□ -1.26
CHFR-211ENST00000535897 RPS17P08708 135 aaKnown RBP7.16□□□□□ -1.26
CHFR-211ENST00000535897 ANXA4P09525 319 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms