RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 DNM1P46Q6ZS02 220 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 PLEKHM3Q6ZWE6 761 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 RPS27LQ71UM5 84 aaKnown RBP10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 SSX8Q7RTT4 187 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 ZNF610Q8N9Z0 462 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 RDH11Q8TC12 318 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 NUDT8Q8WV74 236 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 ZBTB8AQ96BR9 441 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 EFHD2Q96C19 240 aaPredicted RBP10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 CCDC126Q96EE4 140 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 APIPQ96GX9 242 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 FCRL1Q96LA6 429 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 AMDHD1Q96NU7 426 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 TMEM237Q96Q45 408 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 HS3ST6Q96QI5 342 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 ANKRA2Q9H9E1 313 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 C3orf14Q9HBI5 128 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 GIN1Q9NXP7 522 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 KLHL28Q9NXS3 571 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 TMEM216Q9P0N5 145 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 C6orf203Q9P0P8 240 aaPredicted RBP10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 GPR52Q9Y2T5 361 aa10.06□□□□□ -0.8
CLSTN3-206ENST00000535668 A0A087WUV0 522 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 GNG14A0A1W2PPG7 69 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 A0A1W2PQD3 144 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 ETV2O00321 342 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 RSL1D1O76021 490 aaKnown RBP10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 AQP8O94778 261 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 SUPT7LO94864 414 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 ANXA4P09525 319 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 HK1P19367 917 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 ADH6P28332 368 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 CPOXP36551 454 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 PTH2RP49190 550 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 KRTAP1-1Q07627 177 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 PON3Q15166 354 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 UAP1Q16222 522 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 PRSS53Q2L4Q9 553 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 TCHHL1Q5QJ38 904 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 AP1ARQ63HQ0 302 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 OR5M10Q6IEU7 315 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 FAM180BQ6P0A1 224 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 PLXDC2Q6UX71 529 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 APOOLQ6UXV4 268 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 BEND4Q6ZU67 534 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 ESPNLQ6ZVH7 1005 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 P4HA3Q7Z4N8 544 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 MISPQ8IVT2 679 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 CNEP1R1Q8N9A8 125 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 DUSP19Q8WTR2 217 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 ROBO4Q8WZ75 1007 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 EXOSC8Q96B26 276 aaKnown RBP10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 Q96MF0 132 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 HBEGFQ99075 208 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 FMO2Q99518 471 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 PINK1Q9BXM7 581 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 HDHD5Q9BXW7 423 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 OPN3Q9H1Y3 402 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 GLIPR2Q9H4G4 154 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 GSTO2Q9H4Y5 243 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 MED11Q9P086 117 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 DMGDHQ9UI17 866 aaKnown RBP10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 PROCRQ9UNN8 238 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 OR10H1Q9Y4A9 318 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 ACTL7BQ9Y614 415 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 FREM1Q5H8C1 2179 aa10.05□□□□□ -0.8
CLSTN3-206ENST00000535668 GOLGA8QA0A0J9YX86 632 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 GOLGA8OA6NCC3 632 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 GOLGA8NF8WBI6 632 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 H0YC42 278 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 GOLGA8RI6L899 631 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 SMNDC1O75940 238 aaKnown RBP eCLIP10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 CNOT4O95628 575 aaKnown RBP10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 ANGPTL1O95841 491 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 HTR6P50406 440 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 TPD52P55327 224 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 DNAJB13P59910 316 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 SLC7A5Q01650 507 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 PDE7AQ13946 482 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 ZNHIT3Q15649 155 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 WHAMMP3Q1A5X7 153 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 VPS26BQ4G0F5 336 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 CPTPQ5TA50 214 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 RAET1LQ5VY80 246 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 HEPHL1Q6MZM0 1159 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 WDR75Q8IWA0 830 aaKnown RBP10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 MZB1Q8WU39 189 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 MRRFQ96E11 262 aaKnown RBP10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 PIK3IP1Q96FE7 263 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 FAM111AQ96PZ2 611 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 BBS4Q96RK4 519 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 MDFIQ99750 246 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 CXorf56Q9H5V9 222 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 LRTM1Q9HBL6 345 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 ACSS1Q9NUB1 689 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 EMC9Q9Y3B6 208 aa10.04□□□□□ -0.8
CLSTN3-206ENST00000535668 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 C17orf51A8MQB3 221 aa10.03□□□□□ -0.8
CLSTN3-206ENST00000535668 UBFD1O14562 309 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms