RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 MYEF2Q9P2K5 600 aaKnown RBP17.15■□□□□ 0.34
SFSWAP-203ENST00000535236 FMN2Q9NZ56 1722 aa17.14■□□□□ 0.34
SFSWAP-203ENST00000535236 PLSCR5A0PG75 271 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 TVP23AA6NH52 213 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 HMX3A6NHT5 357 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 RAB3AP20336 220 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 CHRNB4P30926 498 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 HLCSP50747 726 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 IRF4Q15306 451 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 SYT14Q8NB59 555 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 TOMM40LQ969M1 308 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 RNF38Q9H0F5 515 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 OR51B6Q9H340 312 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 CNIH4Q9P003 139 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 IL17CQ9P0M4 197 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 BTNL2Q9UIR0 455 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 C2orf72A6NCS6 295 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 HSD17B1P14061 328 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 RIPPLY1Q0D2K3 151 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 C3orf38Q5JPI3 329 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 ASRGL1Q7L266 308 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 CNEP1R1Q8N9A8 125 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 LRRC15Q8TF66 581 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 OR10A5Q9H207 317 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 OR10A2Q9H208 303 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 PLEK2Q9NYT0 353 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 SLC35A3Q9Y2D2 325 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 MPIG6BO95866 241 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 CD6P30203 668 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 GMPRP36959 345 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 GLO1Q04760 184 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 METTL2BQ6P1Q9 378 aaKnown RBP17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 LIPIQ6XZB0 460 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 TSPYL5Q86VY4 417 aaPredicted RBP17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 BORCS7Q96B45 105 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 KLF16Q9BXK1 252 aaPredicted RBP17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 HAO2Q9NYQ3 351 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 SLC6A14Q9UN76 642 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 CD68P34810 354 aaPredicted RBP17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 PNCKQ6P2M8 343 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 GPR26Q8NDV2 337 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 S100PBPQ96BU1 408 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 ZMYND19Q96E35 227 aaPredicted RBP17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 TP53TG5Q9Y2B4 290 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 IER3IP1Q9Y5U9 82 aa17.14■□□□□ 0.33
SFSWAP-203ENST00000535236 KNG1P01042 644 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 HTR3AP46098 478 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 TP53I3Q53FA7 332 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 C1orf220Q5T0J3 134 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 LETMD1Q6P1Q0 360 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 PHOSPHO2Q8TCD6 241 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 TMEM239Q8WW34 195 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 NAT6Q93015 286 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 ISG20Q96AZ6 181 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 CACNG6Q9BXT2 260 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 ENKD1Q9H0I2 346 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 TBCCD1Q9NVR7 557 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 ERVK13-1Q9NX77 482 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 RNASET2O00584 256 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 SMAD6O43541 496 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 NUDT21O43809 227 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 DNAJB6O75190 326 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 DCST2Q5T1A1 773 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 TMEM150AQ86TG1 271 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 CPXM2Q8N436 756 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 ACOT4Q8N9L9 421 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 GPR150Q8NGU9 434 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 TBC1D20Q96BZ9 403 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 PITHD1Q9GZP4 211 aaPredicted RBP17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 SYNPO2LQ9H987 977 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 PLEKHJ1Q9NW61 149 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 EMC3Q9P0I2 261 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 TRBV11-1A0A0K0K1C0 115 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 RAB4BP61018 213 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 MOGSQ13724 837 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 AKR1C8PQ5T2L2 129 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 PARS2Q7L3T8 475 aaKnown RBP17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 CPOQ8IVL8 374 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 CYB561A3Q8NBI2 242 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 OR52R1Q8NGF1 315 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 RSC1A1Q92681 617 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 FGF13Q92913 245 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 DTD2Q96FN9 168 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 CASD1Q96PB1 797 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 ALG8Q9BVK2 526 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 HAPLN2Q9GZV7 340 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 MYOM1P52179 1685 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 A0A1B0GV50 99 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 PRSS38A1L453 326 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 LDB3O75112 727 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 IL7P13232 177 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 PIN1Q13526 163 aaPredicted RBP17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 CHFRQ96EP1 664 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 PREBQ9HCU5 417 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 GPR160Q9UJ42 338 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 CARD8Q9Y2G2 431 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 PEAK1Q9H792 1746 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 NPIPA5A0A0B4J1W7 369 aa17.13■□□□□ 0.33
SFSWAP-203ENST00000535236 LOC102725191A0A1B0GVB3 256 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms