RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 LIFP15018 202 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 TNNI3P19429 210 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 GGT1P19440 569 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 UQCRC2P22695 453 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 GP2P55259 537 aaKnown RBP11.42□□□□□ -0.58
SCARB1-204ENST00000535005 FUT7Q11130 342 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 SELENBP1Q13228 472 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 OTUD3Q5T2D3 398 aaPredicted RBP11.42□□□□□ -0.58
SCARB1-204ENST00000535005 ZNF691Q5VV52 312 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 FAAH2Q6GMR7 532 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 FAM111BQ6SJ93 734 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 TBPL2Q6SJ96 375 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 ZNF621Q6ZSS3 439 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 STK32CQ86UX6 486 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 MSRB3Q8IXL7 192 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 OR2L13Q8N349 312 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 MORN4Q8NDC4 146 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 ZNF248Q8NDW4 579 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 DYNC2LI1Q8TCX1 351 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 RORBQ92753 470 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 YIPF6Q96EC8 236 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 REXO5Q96IC2 774 aaKnown RBP11.42□□□□□ -0.58
SCARB1-204ENST00000535005 ART5Q96L15 291 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 MBOAT4Q96T53 435 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 ZNF700Q9H0M5 742 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 C3orf14Q9HBI5 128 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 PNO1Q9NRX1 252 aaKnown RBP11.42□□□□□ -0.58
SCARB1-204ENST00000535005 SLC6A13Q9NSD5 602 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 NPAP1Q9NZP6 1156 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 C19orf53Q9UNZ5 99 aaPredicted RBP11.42□□□□□ -0.58
SCARB1-204ENST00000535005 TPRKBQ9Y3C4 175 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 PCDHB14Q9Y5E9 798 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 CLCA3PQ9Y6N3 262 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 CCDC88CQ9P219 2028 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 WDFY3Q8IZQ1 3526 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 CENPBD1B2RD01 187 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 SOCS6O14544 535 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 TLX3O43711 291 aaPredicted RBP11.42□□□□□ -0.58
SCARB1-204ENST00000535005 NADKO95544 446 aaPredicted RBP11.42□□□□□ -0.58
SCARB1-204ENST00000535005 DDAH2O95865 285 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 ABCB1P08183 1280 aaPredicted RBP11.42□□□□□ -0.58
SCARB1-204ENST00000535005 BMP4P12644 408 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 MC3RP41968 323 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 CCT3P49368 545 aaKnown RBP11.42□□□□□ -0.58
SCARB1-204ENST00000535005 GPR143P51810 404 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 SELPLGQ14242 412 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 CRTC2Q53ET0 693 aaPredicted RBP11.42□□□□□ -0.58
SCARB1-204ENST00000535005 TRMT12Q53H54 448 aaKnown RBP11.42□□□□□ -0.58
SCARB1-204ENST00000535005 RUNDC3AQ59EK9 446 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 RABL3Q5HYI8 236 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 SYT6Q5T7P8 510 aaPredicted RBP11.42□□□□□ -0.58
SCARB1-204ENST00000535005 KIRREL2Q6UWL6 708 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 TMEM107Q6UX40 140 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 P2RY8Q86VZ1 359 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 VWA5B2Q8N398 1253 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 NFAM1Q8NET5 270 aaPredicted RBP11.42□□□□□ -0.58
SCARB1-204ENST00000535005 OR7G2Q8NG99 324 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 OR7G1Q8NGA0 311 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 OR56A1Q8NGH5 318 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 OR5K1Q8NHB7 308 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 RHOXF1Q8NHV9 184 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 ADAMTS17Q8TE56 1095 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 KAT2AQ92830 837 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 FAM120BQ96EK7 910 aaKnown RBP11.42□□□□□ -0.58
SCARB1-204ENST00000535005 SENP5Q96HI0 755 aaPredicted RBP11.42□□□□□ -0.58
SCARB1-204ENST00000535005 DACH2Q96NX9 599 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 IP6K3Q96PC2 410 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 LPAR4Q99677 370 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 DPH1Q9BZG8 443 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 SLC25A37Q9NYZ2 338 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 VAPAQ9P0L0 249 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 TESMINQ9Y4I5 508 aa11.42□□□□□ -0.58
SCARB1-204ENST00000535005 IGHV1-45A0A0A0MS14 117 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 A8MUA0 341 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 UPK1BO75841 260 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 CBX7O95931 251 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 IGKV3-11P04433 115 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 PTGER1P34995 402 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 UGT2B10P36537 528 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 PRR5P85299 388 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 CD47Q08722 323 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 GAB1Q13480 694 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 ZNF267Q14586 743 aaPredicted RBP11.41□□□□□ -0.58
SCARB1-204ENST00000535005 PCOLCEQ15113 449 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 GTDC1Q4AE62 458 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 BHLHB9Q6PI77 547 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 PAPD4Q6PIY7 484 aaKnown RBP11.41□□□□□ -0.58
SCARB1-204ENST00000535005 IFNEQ86WN2 208 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 RAB43Q86YS6 212 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 HIPK1Q86Z02 1210 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 OR11G2Q8NGC1 345 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 ZFP90Q8TF47 636 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 FAR1Q8WVX9 515 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 FCGR1BQ92637 280 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 C8orf44Q96CB5 159 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 NEURL3Q96EH8 262 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 IMMP1LQ96LU5 166 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 ZNF300Q96RE9 604 aaPredicted RBP11.41□□□□□ -0.58
SCARB1-204ENST00000535005 SEPHS2Q99611 448 aa11.41□□□□□ -0.58
SCARB1-204ENST00000535005 SH3GL1Q99961 368 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms