RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 CASC4Q6P4E1 433 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 PRSS55Q6UWB4 352 aaPredicted RBP2.98□□□□□ -1.93
USP48-215ENST00000534705 FAM198BQ6UWH4 519 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 MFSD7Q6UXD7 560 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 STXBP4Q6ZWJ1 553 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 DET1Q7L5Y6 550 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 PHLDB2Q86SQ0 1253 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 GRAMD2AQ8IUY3 354 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 IFT20Q8IY31 132 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 ZNF595Q8IYB9 648 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 GPR65Q8IYL9 337 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 LRRC34Q8IZ02 419 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 RAB42Q8N4Z0 105 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 ALLCQ8N6M5 410 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 NIPA2Q8N8Q9 360 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.98□□□□□ -1.93
USP48-215ENST00000534705 ROBO4Q8WZ75 1007 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 EXT2Q93063 718 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 C18orf25Q96B23 403 aaPredicted RBP2.98□□□□□ -1.93
USP48-215ENST00000534705 ZNF707Q96C28 371 aaPredicted RBP2.98□□□□□ -1.93
USP48-215ENST00000534705 TUBGCP3Q96CW5 907 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 C5orf30Q96GV9 206 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 CNDP1Q96KN2 507 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 LINC00615Q96LM1 132 aaPredicted RBP2.98□□□□□ -1.93
USP48-215ENST00000534705 PRICKLE1Q96MT3 831 aaPredicted RBP2.98□□□□□ -1.93
USP48-215ENST00000534705 BIRC8Q96P09 236 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 CDCA3Q99618 268 aaPredicted RBP2.98□□□□□ -1.93
USP48-215ENST00000534705 PKP2Q99959 881 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 RBM4BQ9BQ04 359 aaKnown RBP2.98□□□□□ -1.93
USP48-215ENST00000534705 SLC39A3Q9BRY0 314 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 TRIM9Q9C026 710 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 MTMR12Q9C0I1 747 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 SLC7A5P2Q9GIP4 190 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 POMKQ9H5K3 350 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 ECT2Q9H8V3 914 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 PARVBQ9HBI1 364 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 SYTL2Q9HCH5 934 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 PPANQ9NQ55 473 aaKnown RBP2.98□□□□□ -1.93
USP48-215ENST00000534705 FKBP14Q9NWM8 211 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 RHBDL2Q9NX52 303 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 STX18Q9P2W9 335 aaKnown RBP2.98□□□□□ -1.93
USP48-215ENST00000534705 SLC24A2Q9UI40 661 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 DAPK2Q9UIK4 370 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 MAN1B1Q9UKM7 699 aa2.98□□□□□ -1.93
USP48-215ENST00000534705 PRG3Q9Y2Y8 225 aaPredicted RBP2.98□□□□□ -1.93
USP48-215ENST00000534705 CAB39Q9Y376 341 aaPredicted RBP2.98□□□□□ -1.93
USP48-215ENST00000534705 PTPRJQ12913 1337 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 IGLV7-46A0A075B6I9 117 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 PVALEFA0A1B0GWK0 134 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 FUOMA2VDF0 154 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 SMIM30A4D0T7 59 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 ARHGAP42A6NI28 874 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 SDR42E2A6NKP2 422 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 C2orf81A6NN90 581 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 H0YC42 278 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 H7C423 109 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 I3L4J1 428 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 PIRO00625 290 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 FBP2O00757 339 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 HAT1O14929 419 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 POLR2DO15514 142 aaKnown RBP2.97□□□□□ -1.93
USP48-215ENST00000534705 CLDN3O15551 220 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 EXTL3O43909 919 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 KLHL41O60662 606 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 GLRA3O75311 464 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 OXSR1O95747 527 aaPredicted RBP2.97□□□□□ -1.93
USP48-215ENST00000534705 ABHD2P08910 425 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 SMIM18P0DKX4 95 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 HAPLN1P10915 354 aaPredicted RBP2.97□□□□□ -1.93
USP48-215ENST00000534705 ETS1P14921 441 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 EPORP19235 508 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 M6PRP20645 277 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 CYP3A5P20815 502 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 AHCYP23526 432 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 CSTF2P33240 577 aaKnown RBP eCLIP2.97□□□□□ -1.93
USP48-215ENST00000534705 PCK1P35558 622 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 MNDAP41218 407 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 FRKP42685 505 aaPredicted RBP2.97□□□□□ -1.93
USP48-215ENST00000534705 SLC6A12P48065 614 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 ACOT2P49753 483 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 GBX2P52951 348 aaPredicted RBP2.97□□□□□ -1.93
USP48-215ENST00000534705 ACTR1AP61163 376 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 B2MP61769 119 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 XIAPP98170 497 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 GUCY2DQ02846 1103 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 SPAG1Q07617 926 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 MZT1Q08AG7 82 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 C2orf54Q08AI8 447 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 APOFQ13790 326 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 DPYSQ14117 519 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 PSMD5Q16401 504 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 CA9Q16790 459 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 PHKG1Q16816 387 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 UGP2Q16851 508 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 AARDQ4LEZ3 155 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 IFI44LQ53G44 452 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 FASTKD1Q53R41 847 aaKnown RBP2.97□□□□□ -1.93
USP48-215ENST00000534705 HERC4Q5GLZ8 1057 aaPredicted RBP2.97□□□□□ -1.93
USP48-215ENST00000534705 RIPPLY2Q5TAB7 128 aa2.97□□□□□ -1.93
USP48-215ENST00000534705 SPOPLQ6IQ16 392 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms