RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 KRT33BQ14525 404 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 IDNKQ5T6J7 187 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 OR9A2Q8NGT5 310 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 ZNF296Q8WUU4 475 aaPredicted RBP18.1■□□□□ 0.49
CAPN1-226ENST00000533820 ARHGAP9Q9BRR9 750 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 CYB5R1Q9UHQ9 305 aa18.1■□□□□ 0.49
CAPN1-226ENST00000533820 GABRPO00591 440 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 PLOD3O60568 738 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 GABRA5P31644 462 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 AHRP35869 848 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 SLC16A1P53985 500 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 FAPQ12884 760 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 MFSD13AQ14CX5 517 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 FAM27D1Q5T7N8 215 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 C16orf62Q7Z3J2 963 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 KIAA0907Q7Z7F0 614 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-226ENST00000533820 SLC23A1Q9UHI7 598 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 GPR34Q9UPC5 381 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 LRIT2A6NDA9 550 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 LYRM1O43325 122 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 HYAL3O43820 417 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-226ENST00000533820 OR2B3O76000 313 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 PAHP00439 452 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 REEP5Q00765 189 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 ENTPD8Q5MY95 495 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 LRRTM4Q86VH4 590 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 RSPRY1Q96DX4 576 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 TRIM45Q9H8W5 580 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-226ENST00000533820 ACSS1Q9NUB1 689 aaPredicted RBP18.09■□□□□ 0.49
CAPN1-226ENST00000533820 TMEM129A0AVI4 362 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 ALAS2P22557 587 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 EFNB1P98172 346 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 SLC9A5Q14940 896 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 NDUFA9Q16795 377 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 MINDY4Q4G0A6 757 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 OR8H3Q8N146 312 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 FAM181AQ8N9Y4 354 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 TMEM255BQ8WV15 326 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 FGF11Q92914 225 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 ATF6BQ99941 703 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 PTGFRNQ9P2B2 879 aa18.09■□□□□ 0.49
CAPN1-226ENST00000533820 BCL6P41182 706 aa18.08■□□□□ 0.49
CAPN1-226ENST00000533820 FRKP42685 505 aaPredicted RBP18.08■□□□□ 0.49
CAPN1-226ENST00000533820 CAMK1Q14012 370 aa18.08■□□□□ 0.49
CAPN1-226ENST00000533820 CPOQ8IVL8 374 aa18.08■□□□□ 0.49
CAPN1-226ENST00000533820 ZFAND1Q8TCF1 268 aa18.08■□□□□ 0.49
CAPN1-226ENST00000533820 AKAP1Q92667 903 aaKnown RBP eCLIP18.08■□□□□ 0.492e-6■■■□□ 18.5
CAPN1-226ENST00000533820 LINC00615Q96LM1 132 aaPredicted RBP18.08■□□□□ 0.49
CAPN1-226ENST00000533820 TTTY10Q9BZA0 68 aa18.08■□□□□ 0.49
CAPN1-226ENST00000533820 GHITMQ9H3K2 345 aa18.08■□□□□ 0.49
CAPN1-226ENST00000533820 PPP1R3EQ9H7J1 279 aa18.08■□□□□ 0.49
CAPN1-226ENST00000533820 ZFR2Q9UPR6 939 aaKnown RBP18.08■□□□□ 0.49
CAPN1-226ENST00000533820 MYO9BQ13459 2157 aa18.08■□□□□ 0.49
CAPN1-226ENST00000533820 A0A0B4J203 849 aa18.08■□□□□ 0.48
CAPN1-226ENST00000533820 ABHD14A-ACY1A0A1B0GW23 586 aa18.08■□□□□ 0.48
CAPN1-226ENST00000533820 MAN2B1O00754 1011 aa18.08■□□□□ 0.48
CAPN1-226ENST00000533820 NDUFA2O43678 99 aa18.08■□□□□ 0.48
CAPN1-226ENST00000533820 ALPPP05187 535 aa18.08■□□□□ 0.48
CAPN1-226ENST00000533820 RGS8P57771 180 aaPredicted RBP18.08■□□□□ 0.48
CAPN1-226ENST00000533820 SRP54P61011 504 aaKnown RBP18.08■□□□□ 0.48
CAPN1-226ENST00000533820 PPP3R1P63098 170 aa18.08■□□□□ 0.48
CAPN1-226ENST00000533820 TGM3Q08188 693 aa18.08■□□□□ 0.48
CAPN1-226ENST00000533820 FIP1L1Q6UN15 594 aaKnown RBP18.08■□□□□ 0.48
CAPN1-226ENST00000533820 ANKRD33Q7Z3H0 272 aa18.08■□□□□ 0.48
CAPN1-226ENST00000533820 SUN3Q8TAQ9 357 aa18.08■□□□□ 0.48
CAPN1-226ENST00000533820 PPP1R16AQ96I34 528 aa18.08■□□□□ 0.48
CAPN1-226ENST00000533820 OR7D2Q96RA2 312 aa18.08■□□□□ 0.48
CAPN1-226ENST00000533820 SEC22CQ9BRL7 303 aa18.08■□□□□ 0.48
CAPN1-226ENST00000533820 SPATA5L1Q9BVQ7 753 aa18.08■□□□□ 0.48
CAPN1-226ENST00000533820 TMEM245Q9H330 911 aa18.08■□□□□ 0.48
CAPN1-226ENST00000533820 PELI2Q9HAT8 420 aa18.08■□□□□ 0.48
CAPN1-226ENST00000533820 A0A0A6YYD5 115 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 STK25O00506 426 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 NARSO43776 548 aaKnown RBP18.07■□□□□ 0.48
CAPN1-226ENST00000533820 VEGFDO43915 354 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 PRKAR1AP10644 381 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 EPHA5P54756 1037 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 SAMD14Q8IZD0 417 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-226ENST00000533820 ACOT4Q8N9L9 421 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 BBS10Q8TAM1 723 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 SAMD8Q96LT4 415 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 INSM2Q96T92 566 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-226ENST00000533820 SYNPO2LQ9H987 977 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 FGF20Q9NP95 211 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-226ENST00000533820 MRPS23Q9Y3D9 190 aaKnown RBP18.07■□□□□ 0.48
CAPN1-226ENST00000533820 AIFM1O95831 613 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 GSTM3P21266 225 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 P2RY2P41231 377 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 CDK3Q00526 305 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 ZNF234Q14588 700 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 HNRNPA1L2Q32P51 320 aaKnown RBP18.07■□□□□ 0.48
CAPN1-226ENST00000533820 FCRLBQ6BAA4 426 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 GNPDA2Q8TDQ7 276 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 RNF32Q9H0A6 362 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 SAV1Q9H4B6 383 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-226ENST00000533820 MBNL1Q9NR56 388 aaKnown RBP18.07■□□□□ 0.48
CAPN1-226ENST00000533820 RBFOX1Q9NWB1 397 aaKnown RBP18.07■□□□□ 0.48
CAPN1-226ENST00000533820 H2AFY2Q9P0M6 372 aaPredicted RBP18.07■□□□□ 0.48
CAPN1-226ENST00000533820 ENTPD4Q9Y227 616 aa18.07■□□□□ 0.48
CAPN1-226ENST00000533820 EXOSC1Q9Y3B2 195 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms