RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 SHOX2O60902 331 aaPredicted RBP16.3■□□□□ 0.2
PTPN11-204ENST00000531326 CPSF4O95639 269 aaKnown RBP16.3■□□□□ 0.2
PTPN11-204ENST00000531326 NTRK2Q16620 822 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 KRTAP21-3Q3LHN1 58 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 TIGD2Q4W5G0 525 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 AGKQ53H12 422 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 HLA-DQA1Q5Y7H0 255 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 NPSR1Q6W5P4 371 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 MSANTD1Q6ZTZ1 278 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 CPLX4Q7Z7G2 160 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 DND1Q8IYX4 353 aaKnown RBP16.3■□□□□ 0.2
PTPN11-204ENST00000531326 VPS37AQ8NEZ2 397 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 NUP43Q8NFH3 380 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 OR4A15Q8NGL6 344 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 GOT1L1Q8NHS2 421 aaPredicted RBP16.3■□□□□ 0.2
PTPN11-204ENST00000531326 SFXN5Q8TD22 340 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 HOXB13Q92826 284 aaPredicted RBP16.3■□□□□ 0.2
PTPN11-204ENST00000531326 VPS33AQ96AX1 596 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 POM121Q96HA1 1249 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 JSRP1Q96MG2 331 aaPredicted RBP16.3■□□□□ 0.2
PTPN11-204ENST00000531326 BTBD9Q96Q07 612 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 FOXC2Q99958 501 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 GPATCH1Q9BRR8 931 aaKnown RBP16.3■□□□□ 0.2
PTPN11-204ENST00000531326 INPP5KQ9BT40 448 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 POLDIP3Q9BY77 421 aaKnown RBP16.3■□□□□ 0.2
PTPN11-204ENST00000531326 NXF5Q9H1B4 397 aaKnown RBP16.3■□□□□ 0.2
PTPN11-204ENST00000531326 RABEP2Q9H5N1 569 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 C3orf14Q9HBI5 128 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 SAR1AQ9NR31 198 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 CRIM1Q9NZV1 1036 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 B4GALT7Q9UBV7 327 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 ADAM21Q9UKJ8 722 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 GPR55Q9Y2T6 319 aaPredicted RBP16.3■□□□□ 0.2
PTPN11-204ENST00000531326 SNX8Q9Y5X2 465 aa16.3■□□□□ 0.2
PTPN11-204ENST00000531326 KIAA1549Q9HCM3 1950 aa16.29■□□□□ 0.2
PTPN11-204ENST00000531326 TRIM3O75382 744 aaPredicted RBP16.29■□□□□ 0.2
PTPN11-204ENST00000531326 CT45A8P0DMV1 189 aa16.29■□□□□ 0.2
PTPN11-204ENST00000531326 CT45A9P0DMV2 189 aa16.29■□□□□ 0.2
PTPN11-204ENST00000531326 CD99P14209 185 aa16.29■□□□□ 0.2
PTPN11-204ENST00000531326 DRD5P21918 477 aa16.29■□□□□ 0.2
PTPN11-204ENST00000531326 KIR2DL3P43628 341 aa16.29■□□□□ 0.2
PTPN11-204ENST00000531326 PPICP45877 212 aa16.29■□□□□ 0.2
PTPN11-204ENST00000531326 CCT3P49368 545 aaKnown RBP16.29■□□□□ 0.2
PTPN11-204ENST00000531326 PRKAG1P54619 331 aa16.29■□□□□ 0.2
PTPN11-204ENST00000531326 CORO7P57737 925 aa16.29■□□□□ 0.2
PTPN11-204ENST00000531326 DCAF7P61962 342 aa16.29■□□□□ 0.2
PTPN11-204ENST00000531326 ZNF155Q12901 538 aaPredicted RBP16.29■□□□□ 0.2
PTPN11-204ENST00000531326 NNATQ16517 81 aa16.29■□□□□ 0.2
PTPN11-204ENST00000531326 CT45A2Q5DJT8 189 aa16.29■□□□□ 0.2
PTPN11-204ENST00000531326 EXOSC6Q5RKV6 272 aaKnown RBP16.29■□□□□ 0.2
PTPN11-204ENST00000531326 TNIP2Q8NFZ5 429 aa16.29■□□□□ 0.2
PTPN11-204ENST00000531326 NINJ1Q92982 152 aa16.29■□□□□ 0.2
PTPN11-204ENST00000531326 LCORQ96JN0 433 aaPredicted RBP16.29■□□□□ 0.2
PTPN11-204ENST00000531326 MS4A4EQ96PG1 132 aa16.29■□□□□ 0.2
PTPN11-204ENST00000531326 DOHHQ9BU89 302 aa16.29■□□□□ 0.2
PTPN11-204ENST00000531326 RASSF1Q9NS23 344 aa16.29■□□□□ 0.2
PTPN11-204ENST00000531326 ZCCHC3Q9NUD5 404 aaKnown RBP16.29■□□□□ 0.2
PTPN11-204ENST00000531326 ST6GALNAC2Q9UJ37 374 aa16.29■□□□□ 0.2
PTPN11-204ENST00000531326 FRG2CA6NGY1 282 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 HSPB2A8KAH6 182 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 SYT5O00445 386 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 NR5A2O00482 541 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 TO15178 435 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 ERN1O75460 977 aaKnown RBP16.28■□□□□ 0.2
PTPN11-204ENST00000531326 UQCRC1P31930 480 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 CEACAM8P31997 349 aaPredicted RBP16.28■□□□□ 0.2
PTPN11-204ENST00000531326 MAP3K8P41279 467 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 CDKN2CP42773 168 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 PRR5P85299 388 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 PSG6Q00889 435 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 CRYZQ08257 329 aaKnown RBP16.28■□□□□ 0.2
PTPN11-204ENST00000531326 LRRC74AQ0VAA2 488 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 GAB1Q13480 694 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 HSPB2Q16082 182 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 SPDYE7PQ495Y7 208 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 ACSF3Q4G176 576 aaPredicted RBP16.28■□□□□ 0.2
PTPN11-204ENST00000531326 BICRALQ6AI39 1079 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 MFSD12Q6NUT3 480 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 POMZP3Q6PJE2 187 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 SZRD1Q7Z422 152 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 PIGWQ7Z7B1 504 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 TGIF2LYQ8IUE0 185 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 CLEC4FQ8N1N0 589 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 OR56A1Q8NGH5 318 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 OR5AK3PQ8NH89 298 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 MOAP1Q96BY2 351 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 SPDL1Q96EA4 605 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 C16orf58Q96GQ5 468 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 LMF2Q9BU23 707 aaKnown RBP16.28■□□□□ 0.2
PTPN11-204ENST00000531326 NMUR2Q9GZQ4 415 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 CLEC4MQ9H2X3 399 aaPredicted RBP16.28■□□□□ 0.2
PTPN11-204ENST00000531326 EQTNQ9NQ60 294 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 GPATCH2Q9NW75 528 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 PCDHGB4Q9UN71 923 aa16.28■□□□□ 0.2
PTPN11-204ENST00000531326 NIPBLQ6KC79 2804 aaeCLIP16.27■□□□□ 0.2
PTPN11-204ENST00000531326 EXPH5Q8NEV8 1989 aa16.27■□□□□ 0.2
PTPN11-204ENST00000531326 ACANP16112 2415 aa16.27■□□□□ 0.2
PTPN11-204ENST00000531326 ANKRD33BA6NCL7 494 aa16.27■□□□□ 0.2
PTPN11-204ENST00000531326 CCDC154A6NI56 674 aa16.27■□□□□ 0.2
PTPN11-204ENST00000531326 ACOX3O15254 700 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms