RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 FER1L6-AS2Q96M78 137 aa8.09□□□□□ -1.11
CCDC90B-217ENST00000530253 AMDHD1Q96NU7 426 aa8.09□□□□□ -1.11
CCDC90B-217ENST00000530253 DGAT2Q96PD7 388 aa8.09□□□□□ -1.11
CCDC90B-217ENST00000530253 NPAS2Q99743 824 aa8.09□□□□□ -1.11
CCDC90B-217ENST00000530253 TRIM4Q9C037 500 aa8.09□□□□□ -1.11
CCDC90B-217ENST00000530253 ING2Q9H160 280 aa8.09□□□□□ -1.11
CCDC90B-217ENST00000530253 GLIPR2Q9H4G4 154 aa8.09□□□□□ -1.11
CCDC90B-217ENST00000530253 SERHL2Q9H4I8 314 aa8.09□□□□□ -1.11
CCDC90B-217ENST00000530253 MMP25Q9NPA2 562 aa8.09□□□□□ -1.11
CCDC90B-217ENST00000530253 PNO1Q9NRX1 252 aaKnown RBP8.09□□□□□ -1.11
CCDC90B-217ENST00000530253 ING3Q9NXR8 418 aa8.09□□□□□ -1.11
CCDC90B-217ENST00000530253 ERVK-11Q9UQG0 969 aa8.09□□□□□ -1.11
CCDC90B-217ENST00000530253 ENTPD4Q9Y227 616 aa8.09□□□□□ -1.11
CCDC90B-217ENST00000530253 COX11Q9Y6N1 276 aa8.09□□□□□ -1.11
CCDC90B-217ENST00000530253 ASH1LQ9NR48 2969 aaKnown RBP8.09□□□□□ -1.11
CCDC90B-217ENST00000530253 COL12A1Q99715 3063 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 GMNCA6NCL1 334 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 TMEM200CA6NKL6 621 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 DIRC3C9JPN6 131 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 PRKNO60260 465 aaPredicted RBP8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 PSMG1O95456 288 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 IFNA16P05015 189 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 IFI6P09912 130 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 ITGAMP11215 1152 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 COX7A2P14406 83 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 RPL3P39023 403 aaKnown RBP8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 CDK9P50750 372 aaKnown RBP8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 ATP4BP51164 291 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 ARFIP2P53365 341 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 NME5P56597 212 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 FUT7Q11130 342 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 SF3A3Q12874 501 aaKnown RBP eCLIP8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 AIMP2Q13155 320 aaKnown RBP8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 BTBD16Q32M84 506 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 SPANXN4Q5MJ08 99 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 R3HCC1LQ7Z5L2 792 aaKnown RBP8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 FUNDC1Q8IVP5 155 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 SAMD14Q8IZD0 417 aaPredicted RBP8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 FAM9CQ8IZT9 166 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 ZNF615Q8N8J6 731 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 OR7G2Q8NG99 324 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 OR8J2Q8NGG1 315 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 OR1N1Q8NGS0 311 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 OR9A2Q8NGT5 310 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 PSMA8Q8TAA3 256 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 APOBEC4Q8WW27 367 aaKnown RBP8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 DAZLQ92904 295 aaKnown RBP8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 NCLNQ969V3 563 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 VMP1Q96GC9 406 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 SENP5Q96HI0 755 aaPredicted RBP8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 SOX7Q9BT81 388 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 NUDT9Q9BW91 350 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 DPY30Q9C005 99 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 POFUT1Q9H488 388 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 SLC52A3Q9NQ40 469 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 SIRT3Q9NTG7 399 aaPredicted RBP8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 ACSS1Q9NUB1 689 aaPredicted RBP8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 ZIM2Q9NZV7 527 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 PSME2Q9UL46 239 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 G3BP2Q9UN86 482 aaKnown RBP8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 ZNF780BQ9Y6R6 833 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 HECTD1Q9ULT8 2610 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 SPENQ96T58 3664 aaKnown RBP8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 COL6A6A6NMZ7 2263 aa8.08□□□□□ -1.12
CCDC90B-217ENST00000530253 SCN2AQ99250 2005 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 ASPDHA6ND91 283 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 EIF4E1BA6NMX2 242 aaKnown RBP8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 AHRRA9YTQ3 701 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 PLOD2O00469 737 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 OR10H2O60403 315 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 SNX3O60493 162 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 PLOD3O60568 738 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 SLC22A3O75751 556 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 EFNA1P20827 205 aaPredicted RBP8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 NT5EP21589 574 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 ZFP36P26651 326 aaKnown RBP8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 NTSP30990 170 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 PGDP52209 483 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 NCBP2P52298 156 aaKnown RBP eCLIP8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 DGKQP52824 942 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 CLNS1AP54105 237 aaKnown RBP8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 SLC37A1P57057 533 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 IRX1P78414 480 aaPredicted RBP8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 BLOC1S1P78537 153 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 MRPS35P82673 323 aaKnown RBP8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 MRPL49Q13405 166 aaKnown RBP8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 RCAN2Q14206 197 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 SQLEQ14534 574 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 ZNF267Q14586 743 aaPredicted RBP8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 MLC1Q15049 377 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 EBPQ15125 230 aaKnown RBP8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 FAM174BQ3ZCQ3 159 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 TRMT12Q53H54 448 aaKnown RBP8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 CPTPQ5TA50 214 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 METTL21CQ5VZV1 264 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 OR4F3Q6IEY1 312 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 H3F3CQ6NXT2 135 aa8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 JMJD6Q6NYC1 403 aaPredicted RBP8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 ZNF551Q7Z340 670 aaPredicted RBP8.07□□□□□ -1.12
CCDC90B-217ENST00000530253 SPATA21Q7Z572 469 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms