RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 PEX14O75381 377 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 SLC2A10O95528 541 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 GALTP07902 379 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 CYBAP13498 195 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 VIPR1P32241 457 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 TMEM115Q12893 351 aaPredicted RBP13.72□□□□□ -0.21
CAPN1-214ENST00000528165 ZMYND11Q15326 602 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 HENMT1Q5T8I9 393 aaKnown RBP13.72□□□□□ -0.21
CAPN1-214ENST00000528165 TXNDC8Q6A555 127 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 CPOQ8IVL8 374 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 SLITRK4Q8IW52 837 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 KRT78Q8N1N4 520 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 C7orf57Q8NEG2 295 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 OR5W2Q8NH69 310 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 BCL7CQ8WUZ0 217 aaPredicted RBP13.72□□□□□ -0.21
CAPN1-214ENST00000528165 TRMT2BQ96GJ1 504 aaKnown RBP13.72□□□□□ -0.21
CAPN1-214ENST00000528165 C20orf85Q9H1P6 137 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 ZCCHC3Q9NUD5 404 aaKnown RBP13.72□□□□□ -0.21
CAPN1-214ENST00000528165 EMC3Q9P0I2 261 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 RPS6KB2Q9UBS0 482 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 IL20RAQ9UHF4 553 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 SLC13A4Q9UKG4 626 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 YIPF1Q9Y548 306 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 CPSF4LA6NMK7 179 aaKnown RBP13.72□□□□□ -0.21
CAPN1-214ENST00000528165 KRBOX1C9JBD0 128 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 SEPT4O43236 478 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 NTN1O95631 604 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 ALDOBP05062 364 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 ANKRD34CP0C6C1 535 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 KELP23276 732 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 OMPP47874 163 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 ZNF273Q14593 569 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 GRIN2CQ14957 1233 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 SLC25A35Q3KQZ1 300 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 ZNF697Q5TEC3 545 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 KHDRBS2Q5VWX1 349 aaKnown RBP13.72□□□□□ -0.21
CAPN1-214ENST00000528165 FAM198BQ6UWH4 519 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 GDPD4Q6W3E5 623 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 CMIPQ8IY22 773 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 SUN3Q8TAQ9 357 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 GLYATL1Q969I3 302 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 F2RL3Q96RI0 385 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 CD93Q9NPY3 652 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 PRKAG2Q9UGJ0 569 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 GLS2Q9UI32 602 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 HS3ST2Q9Y278 367 aa13.72□□□□□ -0.21
CAPN1-214ENST00000528165 TRABD2BA6NFA1 517 aa13.71□□□□□ -0.21
CAPN1-214ENST00000528165 FAM183AA6NL82 134 aa13.71□□□□□ -0.21
CAPN1-214ENST00000528165 TFP02787 698 aa13.71□□□□□ -0.21
CAPN1-214ENST00000528165 CHRM4P08173 479 aa13.71□□□□□ -0.21
CAPN1-214ENST00000528165 STAT5AP42229 794 aa13.71□□□□□ -0.21
CAPN1-214ENST00000528165 GPR4P46093 362 aa13.71□□□□□ -0.21
CAPN1-214ENST00000528165 PRKAG1P54619 331 aa13.71□□□□□ -0.21
CAPN1-214ENST00000528165 Q6ZVU0 165 aa13.71□□□□□ -0.21
CAPN1-214ENST00000528165 CFAP206Q8IYR0 622 aa13.71□□□□□ -0.21
CAPN1-214ENST00000528165 GJD3Q8N144 294 aa13.71□□□□□ -0.21
CAPN1-214ENST00000528165 HINT3Q9NQE9 182 aaKnown RBP13.71□□□□□ -0.21
CAPN1-214ENST00000528165 BAIAP2Q9UQB8 552 aa13.71□□□□□ -0.21
CAPN1-214ENST00000528165 A0A0G2JK05 382 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 H3BUI4 141 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 L7N2F9 121 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 FRS3O43559 492 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 ADAMTS4O75173 837 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 FGBP02675 491 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 WNT1P04628 370 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 FRKP42685 505 aaPredicted RBP13.71□□□□□ -0.22
CAPN1-214ENST00000528165 KHKP50053 298 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 TPMTP51580 245 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 SLC3A1Q07837 685 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 ST3GAL3Q11203 375 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 TAF1CQ15572 869 aaPredicted RBP13.71□□□□□ -0.22
CAPN1-214ENST00000528165 PIP5KL1Q5T9C9 394 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 CXXC5Q7LFL8 322 aaKnown RBP13.71□□□□□ -0.22
CAPN1-214ENST00000528165 OR10Z1Q8NGY1 313 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 MOSPD2Q8NHP6 518 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 ELMOD3Q96FG2 381 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 YIPF4Q9BSR8 244 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 PINK1Q9BXM7 581 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 QRSL1Q9H0R6 528 aaKnown RBP13.71□□□□□ -0.22
CAPN1-214ENST00000528165 BCL2L10Q9HD36 194 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 SEMA4GQ9NTN9 838 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 IL20Q9NYY1 176 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 ACSL5Q9ULC5 683 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 BACE2Q9Y5Z0 518 aa13.71□□□□□ -0.22
CAPN1-214ENST00000528165 DAPL1A0PJW8 107 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 RGS11O94810 467 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 HMGN1P05114 100 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 GLULP15104 373 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 FPR3P25089 353 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 PRAMEF14Q5SWL7 426 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 PRAMEF13Q5VWM6 474 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 OVCH2Q7RTZ1 564 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 TMEM150AQ86TG1 271 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 CPXM2Q8N436 756 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 C2orf73Q8N5S3 287 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-214ENST00000528165 OR2T33Q8NG76 320 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 OR52H1Q8NGJ2 320 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 AHCYL2Q96HN2 611 aaKnown RBP13.7□□□□□ -0.22
CAPN1-214ENST00000528165 DPYSL5Q9BPU6 564 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 GSDMCQ9BYG8 508 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms