RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 LHCGRP22888 699 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 DTYMKP23919 212 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 FASP25445 335 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 YWHAQP27348 245 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 MAGEB1P43366 347 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 RPS9P46781 194 aaKnown RBP3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 GABRB2P47870 512 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 SLC11A2P49281 568 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 GLUD2P49448 558 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 FHITP49789 147 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 METAP2P50579 478 aaKnown RBP eCLIP3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 NUDT2P50583 147 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 RAB5CP51148 216 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 CEBPGP53567 150 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 CLDN20P56880 219 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ACTBP60709 375 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 CXCR4P61073 352 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 RAP1BP61224 184 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 NCS1P62166 190 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ACTA2P62736 377 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ACTG1P63261 375 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ACTG2P63267 376 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ACTC1P68032 377 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ACTA1P68133 377 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 REEP5Q00765 189 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 TFCP2Q12800 502 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 MALLQ13021 153 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 PIGHQ14442 188 aaPredicted RBP3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 FGFBP1Q14512 234 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 LARS2Q15031 903 aaKnown RBP3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 OR8G1Q15617 311 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ZNF630Q2M218 657 aaPredicted RBP3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ZNF674Q2M3X9 581 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ACTBL2Q562R1 376 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 FAM74A1Q5RGS3 127 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 PRAMEF19Q5SWL8 479 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 C6orf141Q5SZD1 244 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 IZUMO3Q5VZ72 239 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 TTC23Q5W5X9 447 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 WSCD1Q658N2 575 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ABLIM2Q6H8Q1 611 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ETFRF1Q6IPR1 90 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ACSM5Q6NUN0 579 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 SLC30A6Q6NXT4 461 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 RPUSD3Q6P087 351 aaKnown RBP3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 LPCAT3Q6P1A2 487 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 MED27Q6P2C8 311 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 METAP1DQ6UB28 335 aaPredicted RBP3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 AFTPHQ6ULP2 937 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 CHMP1BQ7LBR1 199 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ZNF571Q7Z3V5 609 aaPredicted RBP3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 PTAR1Q7Z6K3 402 aaPredicted RBP3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 AQP12AQ8IXF9 295 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 DCBLD1Q8N8Z6 715 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 DUSP18Q8NEJ0 188 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 DNAAF1Q8NEP3 725 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 OR2D3Q8NGH3 330 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 OR5J2Q8NH18 312 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ETNPPLQ8TBG4 499 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 WDR20Q8TBZ3 569 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 WFIKKN2Q8TEU8 576 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 PAQR8Q8TEZ7 354 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 OIT3Q8WWZ8 545 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ATG4AQ8WYN0 398 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 CENPIQ92674 756 aaPredicted RBP3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 RSC1A1Q92681 617 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 SLC38A4Q969I6 547 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 GJA10Q969M2 543 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 TMEM203Q969S6 136 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 SLAMF9Q96A28 289 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 KIAA1143Q96AT1 154 aaPredicted RBP3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 TM4SF18Q96CE8 201 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 TIFAQ96CG3 184 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 CCDC126Q96EE4 140 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 MED8Q96G25 268 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 SCMH1Q96GD3 660 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 CELF6Q96J87 481 aaKnown RBP3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 LRR1Q96L50 414 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 PRMT6Q96LA8 375 aaPredicted RBP3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 NOL4LQ96MY1 436 aaPredicted RBP3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ATP6V0BQ99437 205 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ACBD6Q9BR61 282 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ZNF577Q9BSK1 485 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 PCGF1Q9BSM1 259 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 NDUFAF3Q9BU61 184 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 SORBS1Q9BX66 1292 aaKnown RBP3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 BEX2Q9BXY8 128 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 DGCR6LQ9BY27 220 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 B3GNT5Q9BYG0 378 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ING2Q9H160 280 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 SLC12A5Q9H2X9 1139 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 NXF3Q9H4D5 531 aaKnown RBP3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 EVA1AQ9H8M9 152 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 WDR41Q9HAD4 459 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 CACYBPQ9HB71 228 aaKnown RBP3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 SAYSD1Q9NPB0 183 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 ADAP2Q9NPF8 381 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 AGPAT4Q9NRZ5 378 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 TBC1D13Q9NVG8 400 aa3.46□□□□□ -1.86
CLNS1A-209ENST00000527299 NSMCE4AQ9NXX6 385 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms