RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 NTN1O95631 604 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 OPN1LWP04000 364 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 INHBAP08476 426 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 TIA1P31483 386 aaKnown RBP eCLIP12.77□□□□□ -0.37
CPSF1-201ENST00000526271 MAP3K8P41279 467 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 EXOC3L2Q2M3D2 409 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 SH2D4BQ5SQS7 431 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 ZNF678Q5SXM1 525 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 GALNT18Q6P9A2 607 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 TMEM107Q6UX40 140 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 CNPY4Q8N129 248 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 MEIOBQ8N635 442 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 OR2W6PQ8NHA6 318 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 HOXB13Q92826 284 aaPredicted RBP12.77□□□□□ -0.37
CPSF1-201ENST00000526271 ZNF524Q96C55 264 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 ZNF382Q96SR6 550 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 MRPL57Q9BQC6 102 aaKnown RBP12.77□□□□□ -0.37
CPSF1-201ENST00000526271 MRPL46Q9H2W6 279 aaKnown RBP12.77□□□□□ -0.37
CPSF1-201ENST00000526271 GLIPR2Q9H4G4 154 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 TNFRSF12AQ9NP84 129 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 PSME2Q9UL46 239 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 SNX6Q9UNH7 406 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 PROCRQ9UNN8 238 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 C19orf53Q9UNZ5 99 aaPredicted RBP12.77□□□□□ -0.37
CPSF1-201ENST00000526271 TIMM22Q9Y584 194 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 ANK2Q01484 3957 aa12.77□□□□□ -0.37
CPSF1-201ENST00000526271 TRIM49D1C9J1S8 452 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 OVOL3O00110 214 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 UBFD1O14562 309 aaKnown RBP12.76□□□□□ -0.37
CPSF1-201ENST00000526271 GMFGO60234 142 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 SS18L1O75177 396 aaPredicted RBP12.76□□□□□ -0.37
CPSF1-201ENST00000526271 SMIM24O75264 130 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 ESRRBO95718 433 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 IL33O95760 270 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 JUNP05412 331 aaKnown RBP12.76□□□□□ -0.37
CPSF1-201ENST00000526271 SOD3P08294 240 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 HSD3B1P14060 373 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 IL11P20809 199 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 HSD3B2P26439 372 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 SHC1P29353 583 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 ZNF155Q12901 538 aaPredicted RBP12.76□□□□□ -0.37
CPSF1-201ENST00000526271 CSTF3Q12996 717 aaKnown RBP12.76□□□□□ -0.37
CPSF1-201ENST00000526271 TSC22D1Q15714 1073 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 GRAMD1BQ3KR37 738 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 LGSNQ5TDP6 509 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 FAM71E1Q6IPT2 247 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 MFSD12Q6NUT3 480 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 LRIG3Q6UXM1 1119 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 TIFABQ6ZNK6 161 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 DNM1P46Q6ZS02 220 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 PLEKHM3Q6ZWE6 761 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 FAM9CQ8IZT9 166 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 OR2L13Q8N349 312 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 POC1BQ8TC44 478 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 PLPPR2Q96GM1 343 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 ZIM3Q96PE6 472 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 LMF2Q9BU23 707 aaKnown RBP12.76□□□□□ -0.37
CPSF1-201ENST00000526271 PFDN4Q9NQP4 134 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 FBXO34Q9NWN3 711 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 FAM120CQ9NX05 1096 aaKnown RBP12.76□□□□□ -0.37
CPSF1-201ENST00000526271 SIRT5Q9NXA8 310 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 PSMC3IPQ9P2W1 217 aaPredicted RBP12.76□□□□□ -0.37
CPSF1-201ENST00000526271 TMCO1Q9UM00 188 aa12.76□□□□□ -0.37
CPSF1-201ENST00000526271 A0A087WV62 115 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 A0A0J9YW62 118 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 HS3ST1O14792 307 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 EFNA2O43921 213 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 NDUFS7O75251 213 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 GCM2O75603 506 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-201ENST00000526271 BCAS2O75934 225 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-201ENST00000526271 SNRPAP09012 282 aaKnown RBP12.75□□□□□ -0.37
CPSF1-201ENST00000526271 DANCRP0C864 163 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 COL6A2P12110 1019 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 NUP214P35658 2090 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-201ENST00000526271 KCNJ5P48544 419 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 CASP8Q14790 479 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 CYP27C1Q4G0S4 372 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 BEX5Q5H9J7 111 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 GALNT10Q86SR1 603 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 EXOC3L1Q86VI1 746 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 LSRQ86X29 649 aaPredicted RBP12.75□□□□□ -0.37
CPSF1-201ENST00000526271 ZNF611Q8N823 705 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 EPS8L3Q8TE67 593 aaKnown RBP12.75□□□□□ -0.37
CPSF1-201ENST00000526271 MZB1Q8WU39 189 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 PIK3R3Q92569 461 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 SLC39A3Q9BRY0 314 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 REPIN1Q9BWE0 567 aaKnown RBP12.75□□□□□ -0.37
CPSF1-201ENST00000526271 ABCG2Q9UNQ0 655 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 OR10H1Q9Y4A9 318 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 AP4B1Q9Y6B7 739 aa12.75□□□□□ -0.37
CPSF1-201ENST00000526271 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 A0A096LNT2 108 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 RNF223E7ERA6 249 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 UTS2O95399 124 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 ANGPTL1O95841 491 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 DDCP20711 480 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 EDNRAP25101 427 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 ATP5J2P56134 94 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 PRR5P85299 388 aa12.74□□□□□ -0.37
CPSF1-201ENST00000526271 OCRLQ01968 901 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms