RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 CADP27708 2225 aa20.32■□□□□ 0.84
PVT1-218ENST00000523328 UPK1AO00322 258 aa20.31■□□□□ 0.84
PVT1-218ENST00000523328 ANGPTL1O95841 491 aa20.31■□□□□ 0.84
PVT1-218ENST00000523328 JUNP05412 331 aaKnown RBP20.31■□□□□ 0.84
PVT1-218ENST00000523328 SOD3P08294 240 aa20.31■□□□□ 0.84
PVT1-218ENST00000523328 DANCRP0C864 163 aa20.31■□□□□ 0.84
PVT1-218ENST00000523328 CLK3P49761 638 aaKnown RBP20.31■□□□□ 0.84
PVT1-218ENST00000523328 HTR6P50406 440 aa20.31■□□□□ 0.84
PVT1-218ENST00000523328 ACSM2AQ08AH3 577 aa20.31■□□□□ 0.84
PVT1-218ENST00000523328 C17orf67Q0P5P2 114 aa20.31■□□□□ 0.84
PVT1-218ENST00000523328 RASA2Q15283 850 aa20.31■□□□□ 0.84
PVT1-218ENST00000523328 ACSM2BQ68CK6 577 aa20.31■□□□□ 0.84
PVT1-218ENST00000523328 GALNT18Q6P9A2 607 aa20.31■□□□□ 0.84
PVT1-218ENST00000523328 PODNL1Q6PEZ8 512 aa20.31■□□□□ 0.84
PVT1-218ENST00000523328 TMEM107Q6UX40 140 aa20.31■□□□□ 0.84
PVT1-218ENST00000523328 NPAS1Q99742 590 aa20.31■□□□□ 0.84
PVT1-218ENST00000523328 EBPLQ9BY08 206 aa20.31■□□□□ 0.84
PVT1-218ENST00000523328 Q9N2J8 555 aa20.31■□□□□ 0.84
PVT1-218ENST00000523328 FANCFQ9NPI8 374 aa20.31■□□□□ 0.84
PVT1-218ENST00000523328 NINJ2Q9NZG7 142 aa20.31■□□□□ 0.84
PVT1-218ENST00000523328 VDAC3Q9Y277 283 aa20.31■□□□□ 0.84
PVT1-218ENST00000523328 ESYT3A0FGR9 886 aa20.3■□□□□ 0.84
PVT1-218ENST00000523328 TLX2O43763 284 aaPredicted RBP20.3■□□□□ 0.84
PVT1-218ENST00000523328 GMFGO60234 142 aa20.3■□□□□ 0.84
PVT1-218ENST00000523328 ULK1O75385 1050 aa20.3■□□□□ 0.84
PVT1-218ENST00000523328 SLITRK5O94991 958 aa20.3■□□□□ 0.84
PVT1-218ENST00000523328 ZNF17P17021 662 aa20.3■□□□□ 0.84
PVT1-218ENST00000523328 DDCP20711 480 aa20.3■□□□□ 0.84
PVT1-218ENST00000523328 PHBP35232 272 aa20.3■□□□□ 0.84
PVT1-218ENST00000523328 NCBP2P52298 156 aaKnown RBP eCLIP20.3■□□□□ 0.845e-7■■□□□ 13.7
PVT1-218ENST00000523328 PRR5P85299 388 aa20.3■□□□□ 0.84
PVT1-218ENST00000523328 HIPK1Q86Z02 1210 aa20.3■□□□□ 0.84
PVT1-218ENST00000523328 OR2L13Q8N349 312 aa20.3■□□□□ 0.84
PVT1-218ENST00000523328 TRMT61AQ96FX7 289 aaKnown RBP20.3■□□□□ 0.84
PVT1-218ENST00000523328 ZNF382Q96SR6 550 aa20.3■□□□□ 0.84
PVT1-218ENST00000523328 LMF2Q9BU23 707 aaKnown RBP20.3■□□□□ 0.84
PVT1-218ENST00000523328 FUT8Q9BYC5 575 aa20.3■□□□□ 0.84
PVT1-218ENST00000523328 TBL1XR1Q9BZK7 514 aa20.3■□□□□ 0.84
PVT1-218ENST00000523328 GLRX2Q9NS18 164 aa20.3■□□□□ 0.84
PVT1-218ENST00000523328 ZDHHC18Q9NUE0 388 aa20.3■□□□□ 0.84
PVT1-218ENST00000523328 PAQR5Q9NXK6 330 aaPredicted RBP20.3■□□□□ 0.84
PVT1-218ENST00000523328 STOML1Q9UBI4 398 aa20.3■□□□□ 0.84
PVT1-218ENST00000523328 MRTO4Q9UKD2 239 aaKnown RBP20.3■□□□□ 0.84
PVT1-218ENST00000523328 MCTS1Q9ULC4 181 aaKnown RBP20.3■□□□□ 0.84
PVT1-218ENST00000523328 CD5LO43866 347 aa20.29■□□□□ 0.84
PVT1-218ENST00000523328 UTS2O95399 124 aa20.29■□□□□ 0.84
PVT1-218ENST00000523328 THBS1P07996 1170 aa20.29■□□□□ 0.84
PVT1-218ENST00000523328 INHBAP08476 426 aa20.29■□□□□ 0.84
PVT1-218ENST00000523328 IDUAP35475 653 aa20.29■□□□□ 0.84
PVT1-218ENST00000523328 RFX3P48380 749 aa20.29■□□□□ 0.84
PVT1-218ENST00000523328 GRAMD1BQ3KR37 738 aa20.29■□□□□ 0.84
PVT1-218ENST00000523328 UNC50Q53HI1 259 aa20.29■□□□□ 0.84
PVT1-218ENST00000523328 SLCO5A1Q9H2Y9 848 aa20.29■□□□□ 0.84
PVT1-218ENST00000523328 NFU1Q9UMS0 254 aa20.29■□□□□ 0.84
PVT1-218ENST00000523328 RNF115Q9Y4L5 304 aa20.29■□□□□ 0.84
PVT1-218ENST00000523328 ADAMDEC1O15204 470 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 CXCL13O43927 109 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 SUPT7LO94864 414 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 IGKV1D-16P01601 117 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 TP53P04637 393 aaPredicted RBP20.28■□□□□ 0.84
PVT1-218ENST00000523328 ANXA4P09525 319 aaPredicted RBP20.28■□□□□ 0.84
PVT1-218ENST00000523328 PSMA4P25789 261 aaKnown RBP20.28■□□□□ 0.84
PVT1-218ENST00000523328 AGTR1P30556 359 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 ACVR1BP36896 505 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 GSTM5P46439 218 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 PSMD4P55036 377 aaKnown RBP20.28■□□□□ 0.84
PVT1-218ENST00000523328 ZNF678Q5SXM1 525 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 MFSD12Q6NUT3 480 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 DNM1P46Q6ZS02 220 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 GALNT10Q86SR1 603 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 STK32CQ86UX6 486 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 WDR75Q8IWA0 830 aaKnown RBP20.28■□□□□ 0.84
PVT1-218ENST00000523328 GTPBP8Q8N3Z3 284 aaPredicted RBP20.28■□□□□ 0.84
PVT1-218ENST00000523328 METTL6Q8TCB7 284 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 FBXW5Q969U6 566 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 S100PBPQ96BU1 408 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 PAFAH2Q99487 392 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 GLIPR2Q9H4G4 154 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 C12orf49Q9H741 205 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 DDX18Q9NVP1 670 aaKnown RBP20.28■□□□□ 0.84
PVT1-218ENST00000523328 SIRT5Q9NXA8 310 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 TAS2R7Q9NYW3 318 aa20.28■□□□□ 0.84
PVT1-218ENST00000523328 MAGED1Q9Y5V3 778 aaPredicted RBP20.28■□□□□ 0.84
PVT1-218ENST00000523328 GXYLT2A0PJZ3 443 aa20.27■□□□□ 0.84
PVT1-218ENST00000523328 GCM2O75603 506 aaPredicted RBP20.27■□□□□ 0.84
PVT1-218ENST00000523328 SYNGR4O95473 234 aa20.27■□□□□ 0.84
PVT1-218ENST00000523328 IFNA2P01563 188 aa20.27■□□□□ 0.84
PVT1-218ENST00000523328 OPN1LWP04000 364 aa20.27■□□□□ 0.84
PVT1-218ENST00000523328 HMOX2P30519 316 aa20.27■□□□□ 0.84
PVT1-218ENST00000523328 CDKN1AP38936 164 aa20.27■□□□□ 0.84
PVT1-218ENST00000523328 SERPINB9P50453 376 aa20.27■□□□□ 0.84
PVT1-218ENST00000523328 BTKQ06187 659 aa20.27■□□□□ 0.84
PVT1-218ENST00000523328 C2orf80Q0P641 193 aa20.27■□□□□ 0.84
PVT1-218ENST00000523328 ZNHIT3Q15649 155 aaPredicted RBP20.27■□□□□ 0.84
PVT1-218ENST00000523328 NCMAPQ5T1S8 102 aa20.27■□□□□ 0.84
PVT1-218ENST00000523328 ALKBH2Q6NS38 261 aa20.27■□□□□ 0.84
PVT1-218ENST00000523328 GPRIN3Q6ZVF9 776 aa20.27■□□□□ 0.84
PVT1-218ENST00000523328 STEAP2Q8NFT2 490 aa20.27■□□□□ 0.84
PVT1-218ENST00000523328 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.27■□□□□ 0.84
PVT1-218ENST00000523328 SLC9A6Q92581 669 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms