RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 SLC22A8Q8TCC7 542 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 SPPL2AQ8TCT8 520 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 PYDC1Q8WXC3 89 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 GEMIN6Q8WXD5 167 aaKnown RBP12.05□□□□□ -0.48
CPNE3-205ENST00000522240 DIO2Q92813 273 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 HSH2DQ96JZ2 352 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 DOHHQ9BU89 302 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 PINK1Q9BXM7 581 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 YY1AP1Q9H869 796 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 EVA1AQ9H8M9 152 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 RNPEPL1Q9HAU8 725 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 MKLN1Q9UL63 735 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 AP4S1Q9Y587 144 aa12.05□□□□□ -0.48
CPNE3-205ENST00000522240 LAMA5O15230 3695 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 NPIPB9F8W1W9 429 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 TSPAN2O60636 221 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 FCMRO60667 390 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 NADKO95544 446 aaPredicted RBP12.04□□□□□ -0.48
CPNE3-205ENST00000522240 ATP6V1G2O95670 118 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 FCGR1AP12314 374 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 NID1P14543 1247 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 NAGAP17050 411 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 ABCD3P28288 659 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 IL12BP29460 328 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 DCTP40126 519 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 TMED10P49755 219 aaKnown RBP12.04□□□□□ -0.48
CPNE3-205ENST00000522240 PNLIPRP2P54317 469 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 LARS2Q15031 903 aaKnown RBP12.04□□□□□ -0.48
CPNE3-205ENST00000522240 RCN1Q15293 331 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 GPR68Q15743 365 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 ZNF141Q15928 474 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 ZSWIM7Q19AV6 140 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 IFI44LQ53G44 452 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 TBCELQ5QJ74 424 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 RNF220Q5VTB9 566 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 JMJD6Q6NYC1 403 aaPredicted RBP12.04□□□□□ -0.48
CPNE3-205ENST00000522240 OLIG3Q7RTU3 272 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 ZAR1Q86SH2 424 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 GPR32P1Q8NGA4 272 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 SNIP1Q8TAD8 396 aaKnown RBP12.04□□□□□ -0.48
CPNE3-205ENST00000522240 THAP4Q8WY91 577 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 TMBIM1Q969X1 311 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 SLCO4A1Q96BD0 722 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 OMA1Q96E52 524 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 FER1L6-AS2Q96M78 137 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 HOXD1Q9GZZ0 328 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 RASSF4Q9H2L5 321 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 FBXO34Q9NWN3 711 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 MYOTQ9UBF9 498 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 DKK4Q9UBT3 224 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 RALYQ9UKM9 306 aaKnown RBP12.04□□□□□ -0.48
CPNE3-205ENST00000522240 AURKCQ9UQB9 309 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 ZNF443Q9Y2A4 671 aaPredicted RBP12.04□□□□□ -0.48
CPNE3-205ENST00000522240 V9GYQ6 96 aa12.04□□□□□ -0.48
CPNE3-205ENST00000522240 EXPH5Q8NEV8 1989 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 OR6C70A6NIJ9 312 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 HNRNPRO43390 633 aaKnown RBP12.03□□□□□ -0.48
CPNE3-205ENST00000522240 HS6ST1O60243 411 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 PPM1BO75688 479 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 UGT2B17O75795 530 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 NGFRP08138 427 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 CELA2AP08217 269 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 SPINK2P20155 84 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 ATP12AP54707 1039 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 KCNJ10P78508 379 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 KCNC4Q03721 635 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 EFR3AQ14156 821 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 ZNF311Q5JNZ3 666 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 VTCN1Q7Z7D3 282 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 VASH2Q86V25 355 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 CMIPQ8IY22 773 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 DND1Q8IYX4 353 aaKnown RBP12.03□□□□□ -0.48
CPNE3-205ENST00000522240 SLC5A8Q8N695 610 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 SMYD1Q8NB12 490 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 ZNF527Q8NB42 609 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 ZNF248Q8NDW4 579 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 OR52P1PQ8NH57 321 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 APOBEC4Q8WW27 367 aaKnown RBP12.03□□□□□ -0.48
CPNE3-205ENST00000522240 ZCCHC14Q8WYQ9 949 aaKnown RBP12.03□□□□□ -0.48
CPNE3-205ENST00000522240 PROX1Q92786 737 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 FGF11Q92914 225 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 TPD52L3Q96J77 140 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 ZNF354BQ96LW1 612 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 LMF1Q96S06 567 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 SEPHS2Q99611 448 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 QRSL1Q9H0R6 528 aaKnown RBP12.03□□□□□ -0.48
CPNE3-205ENST00000522240 ARMC7Q9H6L4 198 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 STX18Q9P2W9 335 aaKnown RBP12.03□□□□□ -0.48
CPNE3-205ENST00000522240 ZNF232Q9UNY5 417 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 NPFFR2Q9Y5X5 522 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 IGSF10Q6WRI0 2623 aa12.03□□□□□ -0.48
CPNE3-205ENST00000522240 APC2O95996 2303 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 CDC14CA4D256 554 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 ZNF891A8MT65 544 aaPredicted RBP12.02□□□□□ -0.49
CPNE3-205ENST00000522240 REM1O75628 298 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 LGI1O95970 557 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 FABP3P05413 133 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 FESP07332 822 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 ITGAMP11215 1152 aa12.02□□□□□ -0.49
CPNE3-205ENST00000522240 IL7RP16871 459 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms