RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 EDNRAP25101 427 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 PTAFRP25105 342 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 APOBEC3AP31941 199 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 BSGP35613 385 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 UBA52P62987 128 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 CRYMQ14894 314 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 RYR3Q15413 4870 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 TGFBIQ15582 683 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 SH2D4BQ5SQS7 431 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 TIMM23BQ5SRD1 257 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 FAHD2BQ6P2I3 314 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 KLHL17Q6TDP4 642 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 NPSR1Q6W5P4 371 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 USP43Q70EL4 1123 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 ADAMTSL2Q86TH1 951 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 CNGA4Q8IV77 575 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 VSTM4Q8IW00 320 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 SLC44A2Q8IWA5 706 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 LAS2Q8IYD9 372 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 NKAPQ8N5F7 415 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 C22orf15Q8WYQ4 148 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 SLC9A6Q92581 669 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 UBE2E3Q969T4 207 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 FAHD2AQ96GK7 314 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 USB1Q9BQ65 265 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 SUCNR1Q9BXA5 334 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 ZNF717Q9BY31 904 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 CNOT10Q9H9A5 744 aaKnown RBP9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 PAQR5Q9NXK6 330 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 CD274Q9NZQ7 290 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 KLHL13Q9P2N7 655 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 PRODH2Q9UF12 536 aa9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 ING1Q9UK53 422 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 GPR55Q9Y2T6 319 aaPredicted RBP9.69□□□□□ -0.86
CTNNA1-234ENST00000522227 LOC105371242A0A075B767 164 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 IGHV3-15A0A0B4J1V0 119 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 CIB4A0PJX0 185 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 OR5H1A6NKK0 313 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 BANF1O75531 89 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 NUDT17P0C025 328 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 SFTPDP35247 375 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 RFX3P48380 749 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 PNLIPRP2P54317 469 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 CARD18P57730 90 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 GPX6P59796 221 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 SNRPD2P62316 118 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 CCNG2Q16589 344 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 MST1LQ2TV78 715 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 CAVIN1Q6NZI2 390 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 Q6ZT83 130 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 NUP43Q8NFH3 380 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 TOR1AIP2Q8NFQ8 470 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 HPS1Q92902 700 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 SIGLEC10Q96LC7 697 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 LRRC37BQ96QE4 947 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 SRXN1Q9BYN0 137 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 MYOZ1Q9NP98 299 aaPredicted RBP9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 SDHAF3Q9NRP4 125 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 DDX28Q9NUL7 540 aaKnown RBP9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 ZNF639Q9UID6 485 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 GRIP1Q9Y3R0 1128 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 OR10H1Q9Y4A9 318 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 SPEF1Q9Y4P9 236 aa9.68□□□□□ -0.86
CTNNA1-234ENST00000522227 GOLGA8QA0A0J9YX86 632 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 GOLGA8OA6NCC3 632 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 B4DSR2 109 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 ATP6V1G2-DDX39BF2Z307 99 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 GOLGA8NF8WBI6 632 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 LYNX1G3V0Z9 82 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 GOLGA8RI6L899 631 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 CBFA2T2O43439 604 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 BCL10O95999 233 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 IGHV3-9P01782 118 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 TACSTD2P09758 323 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 CT45A8P0DMV1 189 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 CT45A9P0DMV2 189 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 LYNX1P0DP58 116 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 DAOP14920 347 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 IFNGR1P15260 489 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 SHC1P29353 583 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 SRSF4Q08170 494 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 TBCCQ15814 346 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 ZNF239Q16600 458 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 SWI5Q1ZZU3 235 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 CT45A2Q5DJT8 189 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 PDSS1Q5T2R2 415 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 ARMC3Q5W041 872 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 SPATA19Q7Z5L4 167 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 NUDT13Q86X67 352 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 TDRPQ86YL5 185 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 BPIFB2Q8N4F0 458 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 TRIM58Q8NG06 486 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 FAM110BQ8TC76 370 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 RNF128Q8TEB7 428 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 RNF138Q8WVD3 245 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 TMEM186Q96B77 213 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 HES6Q96HZ4 224 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 CALR3Q96L12 384 aaKnown RBP9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 RNF145Q96MT1 663 aa9.67□□□□□ -0.86
CTNNA1-234ENST00000522227 DDX31Q9H8H2 851 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms