RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 HCRTR2O43614 444 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 ZG16O60844 167 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 VPS26AO75436 327 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 ERLIN1O75477 346 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 WISP3O95389 354 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 LDOC1O95751 146 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 EML2O95834 649 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 IGHV4-39P01824 125 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 APOHP02749 345 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 SHBGP04278 402 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 HIST1H2ABP04908 130 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 SNRPAP09012 282 aaKnown RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 NUDT17P0C025 328 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 SLC35G4P0C7Q5 338 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 MPC1LP0DKB6 136 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 F3P13726 295 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 PORP16435 677 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 CKMT2P17540 419 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 XRCC1P18887 633 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 HIST1H2ADP20671 130 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 CRABP2P29373 138 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 PDHA2P29803 388 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 HSD17B3P37058 310 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 PSMB10P40306 273 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 MSH2P43246 934 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 RGS4P49798 205 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 LIMK2P53671 638 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 MLLT10P55197 1068 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 CDKN2DP55273 166 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 MAZP56270 477 aaKnown RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 ISL1P61371 349 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 UBE2IP63279 158 aaKnown RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 MRPS34P82930 218 aaKnown RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 PLIN5Q00G26 463 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 HSPA14Q0VDF9 509 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 ABRQ12979 859 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 DNAJC3Q13217 504 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 NFE2L1Q14494 772 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 KRT33BQ14525 404 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 EFTUD2Q15029 972 aaKnown RBP eCLIP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 ZKSCAN8Q15776 578 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 UAP1Q16222 522 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 PNLIPRP3Q17RR3 467 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 KLHL38Q2WGJ6 581 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 C14orf28Q4W4Y0 310 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 ACSBG2Q5FVE4 666 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 CXorf66Q5JRM2 361 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 LGSNQ5TDP6 509 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 ACSM2BQ68CK6 577 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 OR7E24Q6IFN5 339 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 FAM45BPQ6NSW5 357 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 CEACAM20Q6UY09 585 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 GLDNQ6ZMI3 551 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 TIFABQ6ZNK6 161 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 HIST3H2AQ7L7L0 130 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 OTOAQ7RTW8 1153 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 EFL1Q7Z2Z2 1120 aaKnown RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 CCDC91Q7Z6B0 441 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 GLRX5Q86SX6 157 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 NAXDQ8IW45 347 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 SLC22A15Q8IZD6 547 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 IQCKQ8N0W5 287 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 TAGAPQ8N103 731 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 BEST3Q8N1M1 668 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 SFRP1Q8N474 314 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 ARL14Q8N4G2 192 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 MREGQ8N565 214 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 ARL10Q8N8L6 244 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 GPATCH11Q8N954 259 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 AVL9Q8NBF6 648 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 SIDT2Q8NBJ9 832 aaKnown RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 ACVR1CQ8NER5 493 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 OR6C4Q8NGE1 309 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 FAM45AQ8TCE6 357 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 MAPK15Q8TD08 544 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 CD200R1Q8TD46 325 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 SLC37A2Q8TED4 501 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 PPP4R1Q8TF05 950 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 DCAKDQ8WVC6 231 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 UBLCP1Q8WVY7 318 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 PATE1Q8WXA2 126 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 ANKRD7Q92527 254 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 TFGQ92734 400 aaPredicted RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 NAT6Q93015 286 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 TMEM159Q96B96 161 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 FAM120BQ96EK7 910 aaKnown RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 PDLIM5Q96HC4 596 aaKnown RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 ST6GAL2Q96JF0 529 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 ELMO2Q96JJ3 720 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 CNDP2Q96KP4 475 aaKnown RBP2.95□□□□□ -1.94
VPS13B-209ENST00000521559 RMDN2Q96LZ7 410 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 GPR21Q99679 349 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 GPR22Q99680 433 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 RBBP8Q99708 897 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 OLFM1Q99784 485 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 TMEM109Q9BVC6 243 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 C1QTNF5Q9BXJ0 243 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 WWP1Q9H0M0 922 aa2.95□□□□□ -1.94
VPS13B-209ENST00000521559 OR52A5Q9H2C5 316 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms