RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CHI3L2Q15782 390 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 LANCL3Q6ZV70 420 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 HSD11B1LQ7Z5J1 315 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 CENPSQ8N2Z9 138 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 LRRC43Q8N309 656 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 ANKFN1Q8N957 763 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 WDSUB1Q8N9V3 476 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 M1APQ8TC57 530 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 HCAR2Q8TDS4 363 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 RLN3Q8WXF3 142 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 CRYGNQ8WXF5 182 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 SHC3Q92529 594 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 PIWIL1Q96J94 861 aaKnown RBP2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 SLC45A3Q96JT2 553 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 SENP8Q96LD8 212 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 TTC25Q96NG3 672 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 STRADBQ9C0K7 418 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 IKZF5Q9H5V7 419 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 ELOVL3Q9HB03 270 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 C1orf123Q9NWV4 160 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 SIGLEC8Q9NYZ4 499 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 NUDT4Q9NZJ9 180 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 EIF3KQ9UBQ5 218 aaKnown RBP2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 CYTH4Q9UIA0 394 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 MRPS7Q9Y2R9 242 aaKnown RBP2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 GMPPBQ9Y5P6 360 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 DAPK1P53355 1430 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 SAMD9LQ8IVG5 1584 aa2.73□□□□□ -1.97
HMGN1P28-201ENST00000521340 GRIN2AQ12879 1464 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 DEPDC5O75140 1603 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 TDRD15B5MCY1 1934 aaKnown RBP2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 SRRM5B3KS81 715 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 CDX4O14627 284 aaPredicted RBP2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 CFLARO15519 480 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 PPIHO43447 177 aaKnown RBP2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 PALMO75781 387 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 IGKV3-20P01619 116 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 CSF2P04141 144 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 GSTA1P08263 222 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 PBLDP30039 288 aaPredicted RBP2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 CHI3L1P36222 383 aaPredicted RBP2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 PRPHP41219 470 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 PLA2G16P53816 162 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 ATP12AP54707 1039 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 NAPAP54920 295 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 LIM2P55344 173 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 ERVPABLB-1P60509 514 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 IRX1P78414 480 aaPredicted RBP2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 CBX1P83916 185 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 EWSR1Q01844 656 aaKnown RBP eCLIP2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 PAX8Q06710 450 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 CYLC2Q14093 348 aaPredicted RBP2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 ELAVL3Q14576 367 aaKnown RBP2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 RAB35Q15286 201 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 NCOA1Q15788 1441 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 UBE2V2Q15819 145 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 ZIC1Q15915 447 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 TATDN3Q17R31 274 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 RABL6Q3YEC7 729 aaPredicted RBP2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 C14orf177Q52M58 125 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 VWA2Q5GFL6 755 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 MS4A13Q5J8X5 152 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 CFAP157Q5JU67 520 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 ACER2Q5QJU3 275 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 BEND6Q5SZJ8 279 aaPredicted RBP2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 TTC23Q5W5X9 447 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 ZNF57Q68EA5 555 aaPredicted RBP2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 FAM71F2Q6NXP2 309 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 DPY19L4Q7Z388 723 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 ABHD12Q8N2K0 398 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 FGFRL1Q8N441 504 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 EIF1ADQ8N9N8 165 aaKnown RBP2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 OR52J3Q8NH60 311 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 SNED1Q8TER0 1413 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 ARNTL2Q8WYA1 636 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 N4BP2L2Q92802 583 aaPredicted RBP2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 BADQ92934 168 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 COQ2Q96H96 371 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 LINC00479Q96M42 142 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 AMDHD1Q96NU7 426 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 SLC30A2Q9BRI3 323 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 TRIM9Q9C026 710 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 POLR3FQ9H1D9 316 aaPredicted RBP2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 PDS5BQ9NTI5 1447 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 SEC14L4Q9UDX3 406 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 RRP15Q9Y3B9 282 aaKnown RBP2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 CPQQ9Y646 472 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 ROCK1Q13464 1354 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 MTUS2Q5JR59 1369 aa2.72□□□□□ -1.97
HMGN1P28-201ENST00000521340 RALGAPBQ86X10 1494 aa2.71□□□□□ -1.97
HMGN1P28-201ENST00000521340 MAGI1Q96QZ7 1491 aaPredicted RBP2.71□□□□□ -1.97
HMGN1P28-201ENST00000521340 IFT140Q96RY7 1462 aa2.71□□□□□ -1.97
HMGN1P28-201ENST00000521340 TTC37Q6PGP7 1564 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 TRBV7-9A0A0J9YWB2 115 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 FAM74A7A6NL05 159 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 H7C423 109 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 ARPC3O15145 178 aa2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 STX7O15400 261 aaKnown RBP2.71□□□□□ -1.98
HMGN1P28-201ENST00000521340 DCXO43602 365 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms