RNA–Protein interactions for RNA: ENST00000512454.5

EXOSC9-211, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-211ENST00000512454 CCNJQ5T5M9 372 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 HLA-DQA1Q5Y7H0 255 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 TYW3Q6IPR3 259 aaKnown RBP8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 KIRREL2Q6UWL6 708 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 HSDL2Q6YN16 418 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 FKBP9P1Q75LS8 142 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 VTCN1Q7Z7D3 282 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 DTX1Q86Y01 620 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 PQLC1Q8N2U9 271 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 OR8K3Q8NH51 312 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 NUBPLQ8TB37 319 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 SPPL2AQ8TCT8 520 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 GEMIN6Q8WXD5 167 aaKnown RBP8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 TPD52L3Q96J77 140 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 LCORQ96JN0 433 aaPredicted RBP8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 GAL3ST4Q96RP7 486 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 G6PC3Q9BUM1 346 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 CHID1Q9BWS9 393 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 SAP130Q9H0E3 1048 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 IL1RAPQ9NPH3 570 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 AGPAT4Q9NRZ5 378 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 THSD1Q9NS62 852 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 SEC14L3Q9UDX4 400 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 ZNF223Q9UK11 482 aaPredicted RBP8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 KCND3Q9UK17 655 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 BAG5Q9UL15 447 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 MKLN1Q9UL63 735 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 CBLCQ9ULV8 474 aa8.03□□□□□ -1.12
EXOSC9-211ENST00000512454 NCOR2Q9Y618 2525 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 DSPP15924 2871 aaKnown RBP8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 GXYLT2A0PJZ3 443 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 AGAP5A6NIR3 686 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 SOCS6O14544 535 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 TO15178 435 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 BAG2O95816 211 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 ALPPP05187 535 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 CD247P20963 164 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 ATP6V1C1P21283 382 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 RPS4Y1P22090 263 aaKnown RBP8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 PSMD4P55036 377 aaKnown RBP8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 RPS18P62269 152 aaKnown RBP8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 RNF4P78317 190 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 KCNJ10P78508 379 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 SLC34A1Q06495 639 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 DOC2BQ14184 412 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 RTP5Q14D33 572 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 DECR1Q16698 335 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 DUSP7Q16829 419 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 FLYWCH1Q4VC44 716 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 PLAG1Q6DJT9 500 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 NDUFAF7Q7L592 441 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 ERMP1Q7Z2K6 904 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 PPP1R32Q7Z5V6 425 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 PEX5LQ8IYB4 626 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 LILRA2Q8N149 483 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 ZNF619Q8N2I2 560 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 IL22RA1Q8N6P7 574 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 BCORP1Q8N888 145 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 ZNF441Q8N8Z8 693 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 SMYD1Q8NB12 490 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 OR11G2Q8NGC1 345 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 OR4N2Q8NGD1 307 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 OR10Q1Q8NGQ4 319 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 FAM110BQ8TC76 370 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 APOBEC4Q8WW27 367 aaKnown RBP8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 NKD1Q969G9 470 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 TP53INP1Q96A56 240 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 HSPBAP1Q96EW2 488 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 VPS50Q96JG6 964 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 MDFIQ99750 246 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 PINK1Q9BXM7 581 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 QRSL1Q9H0R6 528 aaKnown RBP8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 NXF5Q9H1B4 397 aaKnown RBP8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 TRIM45Q9H8W5 580 aaPredicted RBP8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 CACYBPQ9HB71 228 aaKnown RBP8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 STOML1Q9UBI4 398 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 RIMS3Q9UJD0 308 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 MRTO4Q9UKD2 239 aaKnown RBP8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 IFT52Q9Y366 437 aa8.02□□□□□ -1.13
EXOSC9-211ENST00000512454 ATMQ13315 3056 aa8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 ELOA3CA0A087WX78 387 aaPredicted RBP8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 NSG1A0A0A6YYJ2 146 aa8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 TRBV11-1A0A0K0K1C0 115 aa8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 ELOA3DA6NLF2 546 aaPredicted RBP8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 SYT5O00445 386 aa8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 TPST1O60507 370 aa8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 DEAF1O75398 565 aaPredicted RBP8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 TIPRLO75663 272 aa8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 IGKV1D-16P01601 117 aa8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 MT-ND1P03886 318 aa8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 DBIP07108 87 aaKnown RBP8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 PABPC4LP0CB38 370 aaKnown RBP8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 LIPCP11150 499 aa8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 F8A1P23610 371 aa8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 FASP25445 335 aa8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 ABCD3P28288 659 aa8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 PRKAR1BP31321 381 aa8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 OTX2P32243 289 aa8.01□□□□□ -1.13
EXOSC9-211ENST00000512454 KCNJ5P48544 419 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms