RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 C1orf220Q5T0J3 134 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 GPRC6AQ5T6X5 926 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 TMEM268Q5VZI3 342 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 ATG16L1Q676U5 607 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 PMF1Q6P1K2 205 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 CCBE1Q6UXH8 406 aaPredicted RBP4.85□□□□□ -1.63
GYPB-212ENST00000511198 DNM1P46Q6ZS02 220 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 SHISA6Q6ZSJ9 500 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 MON1BQ7L1V2 547 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 C16orf82Q7Z2V1 217 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 DHDDSQ86SQ9 333 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 SETD3Q86TU7 594 aaPredicted RBP4.85□□□□□ -1.63
GYPB-212ENST00000511198 SPATA24Q86W54 205 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 LRRC6Q86X45 466 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 PHF13Q86YI8 300 aaPredicted RBP4.85□□□□□ -1.63
GYPB-212ENST00000511198 MDS2Q8NDY4 140 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 FBXL13Q8NEE6 735 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 OR6Y1Q8NGX8 325 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 TCP10LQ8TDR4 215 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 HCAR2Q8TDS4 363 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 PAFAH2Q99487 392 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 MAK16Q9BXY0 300 aaKnown RBP4.85□□□□□ -1.63
GYPB-212ENST00000511198 SLC7A5P2Q9GIP4 190 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 Q9H521 79 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 PNPLA3Q9NST1 481 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 THAP1Q9NVV9 213 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 TSPAN16Q9UKR8 245 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 R3HDM2Q9Y2K5 976 aaKnown RBP4.85□□□□□ -1.63
GYPB-212ENST00000511198 MALRD1Q5VYJ5 2156 aa4.85□□□□□ -1.63
GYPB-212ENST00000511198 CASQ2O14958 399 aaPredicted RBP4.84□□□□□ -1.63
GYPB-212ENST00000511198 PIN1P1O15428 100 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 BUD23O43709 281 aaKnown RBP4.84□□□□□ -1.63
GYPB-212ENST00000511198 VEGFDO43915 354 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 BMP10O95393 424 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 SOD1P00441 154 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 SERPINA7P05543 415 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 PYGLP06737 847 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 SERPINA6P08185 405 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 CSF1P09603 554 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 UBTFL6P0CB48 400 aaPredicted RBP4.84□□□□□ -1.63
GYPB-212ENST00000511198 MYL2P10916 166 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 SLC2A4P14672 509 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 UQCRBP14927 111 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 NAGAP17050 411 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 MT3P25713 68 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 EEF1DP29692 281 aaKnown RBP4.84□□□□□ -1.63
GYPB-212ENST00000511198 OR1E1P30953 314 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 HSPA13P48723 471 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 AMTP48728 403 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 SERPINB8P50452 374 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 NUDT6P53370 316 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 MVDP53602 400 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 CASP9P55211 416 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 SEC61A1P61619 476 aaKnown RBP4.84□□□□□ -1.63
GYPB-212ENST00000511198 BST2Q10589 180 aaKnown RBP4.84□□□□□ -1.63
GYPB-212ENST00000511198 WASHC5Q12768 1159 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 PDIA2Q13087 525 aaKnown RBP4.84□□□□□ -1.63
GYPB-212ENST00000511198 MED21Q13503 144 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 OASLQ15646 514 aaKnown RBP4.84□□□□□ -1.63
GYPB-212ENST00000511198 KCTD19Q17RG1 926 aaPredicted RBP4.84□□□□□ -1.63
GYPB-212ENST00000511198 IZUMO4Q1ZYL8 232 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 NKAIN1Q4KMZ8 207 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 ANKRD20A4Q4UJ75 823 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 C1orf146Q5VVC0 180 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 SPINK14Q6IE38 97 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 B3GNT6Q6ZMB0 384 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 RFLNAQ6ZTI6 216 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 NEK10Q6ZWH5 1172 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 ARCQ7LC44 396 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 GALNTL5Q7Z4T8 443 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 PRUNE1Q86TP1 453 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 ZBED8Q8IZ13 594 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 NIPA2Q8N8Q9 360 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 AVL9Q8NBF6 648 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 OR5M9Q8NGP3 310 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 DTX3LQ8TDB6 740 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 PYROXD1Q8WU10 500 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 FAM172AQ8WUF8 416 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 DCAKDQ8WVC6 231 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 C8orf44Q96CB5 159 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 MTBPQ96DY7 904 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 NUS1Q96E22 293 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 PGAP3Q96FM1 320 aaPredicted RBP4.84□□□□□ -1.63
GYPB-212ENST00000511198 CYTH2Q99418 400 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 PIGQQ9BRB3 760 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 MRPS26Q9BYN8 205 aaKnown RBP4.84□□□□□ -1.63
GYPB-212ENST00000511198 KLHL4Q9C0H6 718 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 IQCGQ9H095 443 aaKnown RBP4.84□□□□□ -1.63
GYPB-212ENST00000511198 ATG10Q9H0Y0 220 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 ZNF556Q9HAH1 456 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 KCNK13Q9HB14 408 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 CYP3A43Q9HB55 503 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 S100A14Q9HCY8 104 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 G6PC2Q9NQR9 355 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 PARVAQ9NVD7 372 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 GRHPRQ9UBQ7 328 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 ZNF148Q9UQR1 794 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 IKBKGQ9Y6K9 419 aa4.84□□□□□ -1.63
GYPB-212ENST00000511198 STAB2Q8WWQ8 2551 aa4.84□□□□□ -1.64
GYPB-212ENST00000511198 FRAS1Q86XX4 4008 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms