RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 MARCH9Q86YJ5 346 aa4.3□□□□□ -1.72
CHD1-206ENST00000511067 BPIFB2Q8N4F0 458 aa4.3□□□□□ -1.72
CHD1-206ENST00000511067 SPEM1Q8N4L4 309 aa4.3□□□□□ -1.72
CHD1-206ENST00000511067 NANPQ8TBE9 248 aa4.3□□□□□ -1.72
CHD1-206ENST00000511067 TRIM44Q96DX7 344 aaPredicted RBP4.3□□□□□ -1.72
CHD1-206ENST00000511067 VPS39Q96JC1 886 aa4.3□□□□□ -1.72
CHD1-206ENST00000511067 EFCAB7A8K855 629 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 A8MUI8 341 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 PPIAL4DF5H284 164 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 SAP18O00422 153 aaKnown RBP4.29□□□□□ -1.72
CHD1-206ENST00000511067 BCL2L11O43521 198 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 MBD3O95983 291 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 ALPIP09923 528 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 PDHBP11177 359 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 LAMP1P11279 417 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 XRCC1P18887 633 aaPredicted RBP4.29□□□□□ -1.72
CHD1-206ENST00000511067 ACVR1BP36896 505 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 FNTAP49354 379 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 NTHL1P78549 312 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 BDH1Q02338 343 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 RUNX3Q13761 415 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 NADK2Q4G0N4 442 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 CELF3Q5SZQ8 465 aaKnown RBP4.29□□□□□ -1.72
CHD1-206ENST00000511067 TMEM17Q86X19 198 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 CDC20BQ86Y33 519 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 UNC5CLQ8IV45 518 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 ZDHHC21Q8IVQ6 265 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 SLC39A11Q8N1S5 342 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 MYLPFQ96A32 169 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 SDSLQ96GA7 329 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 TMEM121Q9BTD3 319 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 RAB33BQ9H082 229 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 POLR3FQ9H1D9 316 aaPredicted RBP4.29□□□□□ -1.72
CHD1-206ENST00000511067 SMC3Q9UQE7 1217 aa4.29□□□□□ -1.72
CHD1-206ENST00000511067 MRPS7Q9Y2R9 242 aaKnown RBP4.29□□□□□ -1.72
CHD1-206ENST00000511067 ESYT2A0FGR8 921 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 ZSCAN5BA6NJL1 495 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 CYSRT1A8MQ03 144 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 UFL1O94874 794 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 HNRNPA2B1P22626 353 aaKnown RBP4.28□□□□□ -1.72
CHD1-206ENST00000511067 SNTB2Q13425 540 aaKnown RBP4.28□□□□□ -1.72
CHD1-206ENST00000511067 Q1RN00 199 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 USH1GQ495M9 461 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 LANCL3Q6ZV70 420 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 DPY19L4Q7Z388 723 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 HSCBQ8IWL3 235 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 OR2T34Q8NGX1 318 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 RAET1EQ8TD07 263 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 SPRYD4Q8WW59 207 aaPredicted RBP4.28□□□□□ -1.72
CHD1-206ENST00000511067 IL1F10Q8WWZ1 152 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 TMEM80Q96HE8 168 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 PPP1R16AQ96I34 528 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 RANBP9Q96S59 729 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 TM2D1Q9BX74 207 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 UTP6Q9NYH9 597 aaKnown RBP4.28□□□□□ -1.72
CHD1-206ENST00000511067 DPM3Q9P2X0 92 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 ANAPC7Q9UJX3 599 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 TMCC3Q9ULS5 477 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 POGZQ7Z3K3 1410 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 AGRNO00468 2067 aa4.28□□□□□ -1.72
CHD1-206ENST00000511067 FAM74A7A6NL05 159 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 A8MX80 341 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 SLC2A10O95528 541 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 HBQ1P09105 142 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 CLUP10909 449 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 UMPSP11172 480 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 TBXA2RP21731 343 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 PSMA5P28066 241 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 CDH5P33151 784 aaPredicted RBP4.27□□□□□ -1.73
CHD1-206ENST00000511067 MAGEA9P43362 315 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 GNPDA1P46926 289 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 IST1P53990 364 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 LMO4P61968 165 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 NUCB2P80303 420 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 PAX2Q02962 417 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 CHI3L2Q15782 390 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 PDK4Q16654 411 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 TIMM50Q3ZCQ8 353 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 SLC22A6Q4U2R8 563 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 FAM74A3Q4VXF1 159 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 TEX44Q53QW1 395 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 RABGAP1LQ5R372 815 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 PVRIGQ6DKI7 326 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 C2orf66Q6UXQ4 117 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 BAIAP2L2Q6UXY1 529 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 Q8N9G6 341 aaPredicted RBP4.27□□□□□ -1.73
CHD1-206ENST00000511067 DENND6BQ8NEG7 585 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 C18orf25Q96B23 403 aaPredicted RBP4.27□□□□□ -1.73
CHD1-206ENST00000511067 TXN2Q99757 166 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 PYGO2Q9BRQ0 406 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 ELOVL4Q9GZR5 314 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 POLR1EQ9GZS1 481 aaKnown RBP4.27□□□□□ -1.73
CHD1-206ENST00000511067 RMND5AQ9H871 391 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 AATFQ9NY61 560 aaKnown RBP eCLIP4.27□□□□□ -1.73
CHD1-206ENST00000511067 GSTK1Q9Y2Q3 226 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 OR10H1Q9Y4A9 318 aa4.27□□□□□ -1.73
CHD1-206ENST00000511067 A0A1W2PNV4 684 aa4.26□□□□□ -1.73
CHD1-206ENST00000511067 CCT8L1PA6NM43 557 aa4.26□□□□□ -1.73
CHD1-206ENST00000511067 XPO1O14980 1071 aaKnown RBP4.26□□□□□ -1.73
CHD1-206ENST00000511067 PGAM2P15259 253 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms