RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 GBE1Q04446 702 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 FASTKD3Q14CZ7 662 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 GCNT6Q5T4J0 391 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 C1QL3Q5VWW1 255 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 S100A7AQ86SG5 101 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 LAPTM4BQ86VI4 370 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 CPNE9Q8IYJ1 553 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 OR4N4Q8N0Y3 316 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 GHDCQ8N2G8 530 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 OR5T2Q8NGG2 359 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 OR9A4Q8NGU2 314 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 OR14A16Q8NHC5 309 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PNPT1Q8TCS8 783 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 LIN37Q96GY3 246 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 COX4I2Q96KJ9 171 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 MTERF1Q99551 399 aaKnown RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 SLC30A3Q99726 388 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 G6PC3Q9BUM1 346 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 NTMT1Q9BV86 223 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 IFT27Q9BW83 186 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 HCAR1Q9BXC0 346 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 B3GNT4Q9C0J1 378 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 IPPKQ9H8X2 491 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 LHX9Q9NQ69 397 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PGPEP1Q9NXJ5 209 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 DLL3Q9NYJ7 618 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 KCNIP1Q9NZI2 227 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 AJAP1Q9UKB5 411 aaPredicted RBP2.78□□□□□ -1.96
NEDD4-208ENST00000508342 PROCRQ9UNN8 238 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 BTRCQ9Y297 605 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 FKBP7Q9Y680 259 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 TTC28Q96AY4 2481 aa2.78□□□□□ -1.96
NEDD4-208ENST00000508342 A0A1B0GVI7 797 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 A8MV72 311 aaPredicted RBP2.78□□□□□ -1.97
NEDD4-208ENST00000508342 CHST10O43529 356 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 DNAJA2O60884 412 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 PTHP01270 115 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 IFNA2P01563 188 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 RLN2P04090 185 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 IFNW1P05000 195 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 ZSCAN5DPP0CG00 497 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 CD59P13987 128 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 ACADSP16219 412 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 XRCC1P18887 633 aaPredicted RBP2.78□□□□□ -1.97
NEDD4-208ENST00000508342 PRDX3P30048 256 aaKnown RBP2.78□□□□□ -1.97
NEDD4-208ENST00000508342 SSTR1P30872 391 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 GLP1RP43220 463 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 XCR1P46094 333 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 STARP49675 285 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 SLC26A5P58743 744 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 CDKL1Q00532 357 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 GALNT2Q10471 571 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 NPRL3Q12980 569 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 DOC2AQ14183 400 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 UGT8Q16880 541 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 NLRC3Q7RTR2 1065 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 LRRC56Q8IYG6 542 aaPredicted RBP2.78□□□□□ -1.97
NEDD4-208ENST00000508342 ARMC10Q8N2F6 343 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 OR4K14Q8NGD5 310 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 SSC4DQ8WTU2 575 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 NAT14Q8WUY8 206 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 PEBP4Q96S96 227 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 TTYH2Q9BSA4 534 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 TMED9Q9BVK6 235 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 ACTR6Q9GZN1 396 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 ADAM19Q9H013 955 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 DNTTIP1Q9H147 329 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 OR51B5Q9H339 312 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 PRO3102Q9H379 93 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 SEPSECSQ9HD40 501 aaKnown RBP2.78□□□□□ -1.97
NEDD4-208ENST00000508342 PEF1Q9UBV8 284 aaKnown RBP2.78□□□□□ -1.97
NEDD4-208ENST00000508342 SERGEFQ9UGK8 458 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 ING4Q9UNL4 249 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 GRIP1Q9Y3R0 1128 aa2.78□□□□□ -1.97
NEDD4-208ENST00000508342 MYO18BQ8IUG5 2567 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 A0A1W2PPL8 197 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 MAGEA13PA6NCF6 341 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 OR5K3A6NET4 321 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 TMEM202A6NGA9 273 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 TUBAL3A6NHL2 446 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 BLOC1S5-TXNDC5H3BN57 136 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 KPNA4O00629 521 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SURF4O15260 269 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 NKX2-8O15522 239 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 NIPSNAP2O75323 286 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 DDCP20711 480 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ARSDP51689 593 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 HERV-K104P61576 105 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 EIF4EBP2Q13542 120 aaPredicted RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 RIPK1Q13546 671 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 C9orf152Q5JTZ5 239 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 LRRC38Q5VT99 294 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 CDKAL1Q5VV42 579 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 PAPD4Q6PIY7 484 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 TMIGD1Q6UXZ0 262 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 SLC35F3Q8IY50 421 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 DND1Q8IYX4 353 aaKnown RBP2.77□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF283Q8N7M2 679 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 OR9A2Q8NGT5 310 aa2.77□□□□□ -1.97
NEDD4-208ENST00000508342 OR11L1Q8NGX0 322 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms