RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 SNX4O95219 450 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 SCG5P05408 212 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 HOXC4P09017 264 aaPredicted RBP13.51□□□□□ -0.25
DDX41-208ENST00000507955 AKT2P31751 481 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 CRYBB2P43320 205 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 OMPP47874 163 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 TMEM201Q5SNT2 666 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 NRARPQ7Z6K4 114 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 OR2L13Q8N349 312 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 BBS1Q8NFJ9 593 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 CAPSLQ8WWF8 208 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 ASB15Q8WXK1 588 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 FGF11Q92914 225 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 RERGQ96A58 199 aaPredicted RBP13.51□□□□□ -0.25
DDX41-208ENST00000507955 MOAP1Q96BY2 351 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 SDF2Q99470 211 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 POLDIP3Q9BY77 421 aaKnown RBP13.51□□□□□ -0.25
DDX41-208ENST00000507955 CLCA2Q9UQC9 943 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 V9GYH0 126 aa13.51□□□□□ -0.25
DDX41-208ENST00000507955 FAM183AA6NL82 134 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 TNFSF14O43557 240 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 EFNB1P98172 346 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 COX10Q12887 443 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 EIF2B5Q13144 721 aaKnown RBP13.5□□□□□ -0.25
DDX41-208ENST00000507955 HEPHL1Q6MZM0 1159 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 CDC73Q6P1J9 531 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 LHFPL3Q86UP9 236 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 LAX1Q8IWV1 398 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 FAM26EQ8N5C1 309 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 NANOGP1Q8N7R0 232 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 SMRP1Q8NCR6 262 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 OR4Q3Q8NH05 313 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 ZNF486Q96H40 463 aaPredicted RBP13.5□□□□□ -0.25
DDX41-208ENST00000507955 YIPF2Q9BWQ6 316 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 TPSD1Q9BZJ3 242 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 ENKD1Q9H0I2 346 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 TP63Q9H3D4 680 aaPredicted RBP13.5□□□□□ -0.25
DDX41-208ENST00000507955 GXYLT2A0PJZ3 443 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 A6NL46 340 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 PLD2O14939 933 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 PRKNO60260 465 aaPredicted RBP13.5□□□□□ -0.25
DDX41-208ENST00000507955 RDH16O75452 317 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 PIPP12273 146 aaPredicted RBP13.5□□□□□ -0.25
DDX41-208ENST00000507955 ST6GAL1P15907 406 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 RFX2P48378 723 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 MRPS21P82921 87 aaKnown RBP13.5□□□□□ -0.25
DDX41-208ENST00000507955 CCINQ13939 588 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 ERV3-1Q14264 604 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 TRAM2Q15035 370 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 NCF4Q15080 339 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 ZNF79Q15937 498 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 BAK1Q16611 211 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 AGAP6Q5VW22 663 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 SLC27A4Q6P1M0 643 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 WDR88Q6ZMY6 472 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 OR8H2Q8N162 312 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 OR9A4Q8NGU2 314 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 TEX47Q8TBZ9 253 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 CHAC2Q8WUX2 184 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 ASB12Q8WXK4 309 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 TM9SF4Q92544 642 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 SLC41A3Q96GZ6 507 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 AGAP4Q96P64 663 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 IL21RQ9HBE5 538 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 NEK6Q9HC98 313 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 SNTG1Q9NSN8 517 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 LIPT1Q9Y234 373 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 CSNK1G3Q9Y6M4 447 aa13.5□□□□□ -0.25
DDX41-208ENST00000507955 A0A075B6Q4 140 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 B4DGG1 531 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 HRKO00198 91 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 RGS5O15539 181 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 AZGP1P25311 298 aaKnown RBP13.49□□□□□ -0.25
DDX41-208ENST00000507955 TLX1P31314 330 aaPredicted RBP13.49□□□□□ -0.25
DDX41-208ENST00000507955 SMSP52788 366 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 GAS1P54826 345 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 COPZ1P61923 177 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 ST3GAL3Q11203 375 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 OCLNQ16625 522 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 ZNF628Q5EBL2 1059 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 CD300LDQ6UXZ3 194 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 OR4F15Q8NGB8 312 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 BAHD1Q8TBE0 780 aaPredicted RBP13.49□□□□□ -0.25
DDX41-208ENST00000507955 TP53INP1Q96A56 240 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 RNFT2Q96EX2 444 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 FBRSQ9HAH7 460 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 ATP13A2Q9NQ11 1180 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 ZC3H12DA2A288 527 aaKnown RBP13.49□□□□□ -0.25
DDX41-208ENST00000507955 CYR61O00622 381 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 TNFRSF10CO14798 259 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 MYL12BO14950 172 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 CCNKO75909 580 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 TNFP01375 233 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 THEGLP0DJG4 465 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 HTR2AP28223 471 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 ZNF136P52737 540 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 RHAGQ02094 409 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 TIMM50Q3ZCQ8 353 aa13.49□□□□□ -0.25
DDX41-208ENST00000507955 CCDC92Q53HC0 331 aaPredicted RBP13.49□□□□□ -0.25
DDX41-208ENST00000507955 C1QTNF12Q5T7M4 302 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms