RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 PEX1O43933 1283 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 ICOSLGO75144 302 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 SERPINB7O75635 380 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 IGKV1D-16P01601 117 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 CRYABP02511 175 aaKnown RBP18.41■□□□□ 0.54
USP53-203ENST00000507597 CCL3P10147 92 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 ELAVL4P26378 380 aaKnown RBP18.41■□□□□ 0.54
USP53-203ENST00000507597 SLC7A2P52569 658 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 C17orf67Q0P5P2 114 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 DNAL1Q4LDG9 190 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 SAMD4BQ5PRF9 694 aaKnown RBP18.41■□□□□ 0.54
USP53-203ENST00000507597 SLC6A19Q695T7 634 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 C8orf82Q6P1X6 216 aaPredicted RBP18.41■□□□□ 0.54
USP53-203ENST00000507597 NET1Q7Z628 596 aaPredicted RBP18.41■□□□□ 0.54
USP53-203ENST00000507597 SLC15A3Q8IY34 581 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 BHLHE22Q8NFJ8 381 aaPredicted RBP18.41■□□□□ 0.54
USP53-203ENST00000507597 OR2T12Q8NG77 320 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 TMEM19Q96HH6 336 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 NODALQ96S42 347 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.41■□□□□ 0.54
USP53-203ENST00000507597 B4GALT7Q9UBV7 327 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 MKLN1Q9UL63 735 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 DTNAQ9Y4J8 743 aa18.41■□□□□ 0.54
USP53-203ENST00000507597 PRORSD1PA6NEY8 169 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 EIF4E1BA6NMX2 242 aaKnown RBP18.4■□□□□ 0.54
USP53-203ENST00000507597 FAM220BPB1ANY3 271 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 ALG1L2C9J202 215 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 GTPBP1O00178 669 aaKnown RBP18.4■□□□□ 0.54
USP53-203ENST00000507597 NDUFB5O43674 189 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 KIAA0513O60268 411 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 OXSR1O95747 527 aaPredicted RBP18.4■□□□□ 0.54
USP53-203ENST00000507597 IFNA14P01570 189 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 DBIP07108 87 aaKnown RBP18.4■□□□□ 0.54
USP53-203ENST00000507597 ETS2P15036 469 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 ST13P50502 369 aaKnown RBP18.4■□□□□ 0.54
USP53-203ENST00000507597 PLGLB1Q02325 96 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 VEZF1Q14119 521 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 LARS2Q15031 903 aaKnown RBP18.4■□□□□ 0.54
USP53-203ENST00000507597 ZNF141Q15928 474 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 GRAMD1BQ3KR37 738 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 TYW3Q6IPR3 259 aaKnown RBP18.4■□□□□ 0.54
USP53-203ENST00000507597 CCDC121Q6ZUS5 278 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 PATL1Q86TB9 770 aaKnown RBP18.4■□□□□ 0.54
USP53-203ENST00000507597 ZNF227Q86WZ6 799 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 SULF2Q8IWU5 870 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 DEFB107AQ8IZN7 70 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 ANKFN1Q8N957 763 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 NFKBIDQ8NI38 313 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 GRHL3Q8TE85 626 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 RASSF5Q8WWW0 418 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 TMEM41AQ96HV5 264 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 ZNF597Q96LX8 424 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 ALG2Q9H553 416 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 IKZF5Q9H5V7 419 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 ABCD2Q9UBJ2 740 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.4■□□□□ 0.54
USP53-203ENST00000507597 CFAP47Q6ZTR5 3102 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 PKD1L2Q7Z442 2459 aa18.4■□□□□ 0.54
USP53-203ENST00000507597 ELOVL7A1L3X0 281 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 GSTA4O15217 222 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 FADS1O60427 444 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 PGM3O95394 542 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 IL7RP16871 459 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 MSX1P28360 303 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 PCGF2P35227 344 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 SLC25A3Q00325 362 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 CHRNEQ04844 493 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 LIPEQ05469 1076 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 GABPB1Q06547 395 aaPredicted RBP18.39■□□□□ 0.53
USP53-203ENST00000507597 SELPLGQ14242 412 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 VMACQ2NL98 169 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 PLEKHN1Q494U1 663 aaPredicted RBP18.39■□□□□ 0.53
USP53-203ENST00000507597 PRAMEF20Q5VT98 475 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 FRRS1Q6ZNA5 592 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 GALNT10Q86SR1 603 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 SLC22A16Q86VW1 577 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 IFNEQ86WN2 208 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 CMIPQ8IY22 773 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 ZNF614Q8N883 585 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 OR2M7Q8NG81 312 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 OR1J4Q8NGS1 313 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 OR4C3Q8NH37 302 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 SLC26A7Q8TE54 656 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 KCTD14Q9BQ13 255 aaPredicted RBP18.39■□□□□ 0.53
USP53-203ENST00000507597 TREX2Q9BQ50 279 aaPredicted RBP18.39■□□□□ 0.53
USP53-203ENST00000507597 SLC38A1Q9H2H9 487 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 PTGES2Q9H7Z7 377 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 PPP4R1LQ9P1A2 415 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 TMEM181Q9P2C4 612 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 PRPF19Q9UMS4 504 aaKnown RBP18.39■□□□□ 0.53
USP53-203ENST00000507597 SLC35A3Q9Y2D2 325 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 WIF1Q9Y5W5 379 aa18.39■□□□□ 0.53
USP53-203ENST00000507597 LAMA5O15230 3695 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 GYG2O15488 501 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 FCMRO60667 390 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 ANGPTL1O95841 491 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 C1QCP02747 245 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 CHRM4P08173 479 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 NUDT7P0C024 238 aa18.38■□□□□ 0.53
USP53-203ENST00000507597 T-ENOLP0DO92 83 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms